CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 3
endoplasmic reticulum 6
golgi 4
extracellular 3
vacuole 3
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	golgi
Plant-mPloc:	cytosol, endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50760	Soybean	endoplasmic reticulum	98.45	98.45
VIT_05s0077g01230.t01	Wine grape	endoplasmic reticulum, extracellular	93.26	93.26
KRH37008	Soybean	endoplasmic reticulum	93.26	93.26
KRH11980	Soybean	endoplasmic reticulum, extracellular	93.26	93.26
KRH68446	Soybean	endoplasmic reticulum	92.23	92.23
TraesCS5D01G101300.1	Wheat	golgi	91.71	91.71
KRG96730	Soybean	endoplasmic reticulum	91.71	91.71
TraesCS5B01G095200.1	Wheat	endoplasmic reticulum, extracellular	91.71	91.71
TraesCS3A01G193800.1	Wheat	golgi	91.19	91.19
TraesCS3B01G221700.1	Wheat	endoplasmic reticulum, extracellular	91.19	91.19
KRH50759	Soybean	endoplasmic reticulum	91.19	91.19
TraesCS5A01G089200.1	Wheat	golgi	91.19	91.19
Os12t0560300-01	Rice	plasma membrane	91.19	91.19
PGSC0003DMT400023327	Potato	endoplasmic reticulum, extracellular	91.19	91.19
Solyc01g079540.2.1	Tomato	plastid	91.19	91.19
KRH02329	Soybean	endoplasmic reticulum, extracellular	90.67	90.67
EES00709	Sorghum	endoplasmic reticulum, extracellular	90.67	90.67
TraesCS3D01G196200.1	Wheat	endoplasmic reticulum, extracellular	90.67	90.67
Zm00001d040752_P001	Maize	endoplasmic reticulum, extracellular	90.67	90.67
KXG23692	Sorghum	endoplasmic reticulum, extracellular	90.67	90.67
PGSC0003DMT400018800	Potato	cytosol	90.16	90.16
Os01t0254000-01	Rice	plasma membrane	90.16	90.16
Solyc06g009660.2.1	Tomato	extracellular	90.16	90.16
KRH33832	Soybean	endoplasmic reticulum	90.16	90.16
KRG92955	Soybean	endoplasmic reticulum, extracellular	90.16	90.16
Zm00001d040278_P001	Maize	extracellular	90.16	90.16
EES02699	Sorghum	endoplasmic reticulum, extracellular	90.16	90.16
TraesCS3B01G203800.1	Wheat	endoplasmic reticulum	89.64	89.64
TraesCS3A01G172900.1	Wheat	golgi	89.64	89.64
HORVU3Hr1G035000.2	Barley	plasma membrane	89.64	89.64
Os01t0338000-01	Rice	plasma membrane	89.12	89.12
TraesCS3D01G179300.1	Wheat	endoplasmic reticulum, extracellular	89.64	86.07
TraesCS7B01G236300.1	Wheat	cytosol	77.2	77.2
KXG28257	Sorghum	endoplasmic reticulum	77.2	76.8
HORVU7Hr1G080190.1	Barley	endoplasmic reticulum	76.17	76.17
TraesCS7D01G332100.1	Wheat	endoplasmic reticulum	76.17	76.17
EES15193	Sorghum	endoplasmic reticulum	76.68	75.9
Zm00001d049068_P001	Maize	cytosol	76.17	75.77
VIT_05s0165g00230.t01	Wine grape	cytosol	66.32	75.29
Os06t0225000-00	Rice	endoplasmic reticulum	75.65	75.26
HORVU3Hr1G045150.3	Barley	plastid	76.17	65.92
Zm00001d009211_P001	Maize	mitochondrion	90.67	53.52
KRG91118	Soybean	extracellular	22.28	34.13
KRH58117	Soybean	endoplasmic reticulum	31.09	32.61
KRH28350	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.57	32.07
KRH77133	Soybean	endoplasmic reticulum	30.57	32.07
KRH17349	Soybean	cytosol	29.02	30.43
KRH72981	Soybean	cytosol	29.02	30.43

Protein Annotations

EntrezGene:100815670	MapMan:22.4.2.1	Gene3D:3.40.50.300	EMBL:ACUP02010302	EMBL:BT093399	UniProt:C6T7H0
EnsemblPlantsGene:GLYMA_17G032000	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006810
GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016192	InterPro:IPR006687	EnsemblPlants:KRH02328
ProteinID:KRH02328	ProteinID:KRH02328.1	InterPro:P-loop_NTPase	PFAM:PF00025	PRINTS:PR00328	PFscan:PS51422
PANTHER:PTHR11711	PANTHER:PTHR11711:SF165	SMART:SM00177	SMART:SM00178	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase_ARF/SAR	InterPro:Small_GTPase_SAR1	TIGRFAMs:TIGR00231	UniParc:UPI0001B15AC0	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:-:2352393..2354143

Molecular Weight (calculated)

22085.7 Da

IEP (calculated)

6.277

GRAVY (calculated)

-0.119

Length

193 amino acids

Sequence
(BLAST)

001: MFLVDWFYGI LATLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQYPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAQVDA VVFLVDAFDK
101: ERFSESKKEL DALLSDESLA NVPFLILGNK IDIPYAASED ELRYNMGLTN FTTGKGKVNL VDSNVRPLEV FMCSIVRKMG YGEGFQWLSQ YIK

Best Arabidopsis Sequence Match ( AT3G62560.1 )
(BLAST)

001: MFLVDWFYGV LATLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA NVPFLILGNK IDIPYAASED ELRYHLGLTS FTTGKGKVNL AGTNVRPLEV FMCSIVRKMG YGEGFKWVSQ YID

Arabidopsis Description

Putative Sar1 GTP binding protein [Source:UniProtKB/TrEMBL;Acc:Q8VYP7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.