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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 4
  • cytosol 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
 mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d002027_P002
Zm00001d002475_P001
Zm00001d007647_P001
Zm00001d010055_P003
Zm00001d010603_P002
Zm00001d010806_P001
Zm00001d014267_P001
Zm00001d016021_P001
Zm00001d019348_P001
Zm00001d022148_P001
Zm00001d025321_P001
Zm00001d026150_P001
Zm00001d026206_P001
Zm00001d031493_P001
Zm00001d031612_P001
Zm00001d035920_P002
Zm00001d037747_P001
Zm00001d038756_P001
Zm00001d039455_P002
Zm00001d042866_P001
Zm00001d043018_P001
Zm00001d045559_P002
Zm00001d045580_P001
Zm00001d046215_P001
Zm00001d046992_P001
Zm00001d051524_P002
Zm00001d052322_P001
Zm00001d054082_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G09180.1 Zm00001d045580_P001 AT4G25660.1 21798944
AT1G09180.1 Zm00001d045580_P001 AT4G25680.1 21798944
AT1G09180.1 Zm00001d010603_P002 AT5G01640.1 21798944
AT1G09180.1 Zm00001d043018_P001 AT5G01640.1 21798944
AT1G09180.1 Zm00001d052322_P001 AT5G01640.1 21798944
AT1G09180.1 Zm00001d010055_P003 AT5G02040.1 21798944
AT1G09180.1 Zm00001d042866_P001 AT5G02040.1 21798944
AT1G56330.1 Zm00001d007647_P001 AT2G20130.1 21798944
AT1G56330.1 Zm00001d010806_P001 AT2G20130.1 21798944
AT1G56330.1 Zm00001d016021_P001 AT2G20130.1 21798944
AT1G56330.1 Zm00001d025321_P001 AT2G20130.1 21798944
AT1G56330.1 Zm00001d038756_P001 AT2G20130.1 21798944
AT1G56330.1 Zm00001d037747_P001 AT3G13710.1 21798944
AT1G56330.1 Zm00001d039455_P002 AT3G13710.1 21798944
AT1G56330.1 Zm00001d037747_P001 AT3G13720.1 21798944
AT1G56330.1 Zm00001d039455_P002 AT3G13720.1 21798944
AT1G56330.1 Zm00001d019348_P001 AT3G43230.1 21798944
AT1G56330.1 Zm00001d022148_P001 AT3G43230.1 21798944
AT1G56330.1 Zm00001d002475_P001 AT4G17720.1 21798944
AT1G56330.1 Zm00001d014267_P001 AT4G17720.1 21798944
AT1G56330.1 Zm00001d026150_P001 AT4G17720.1 21798944
AT1G56330.1 Zm00001d026206_P001 AT4G17720.1 21798944
AT1G56330.1 Zm00001d031493_P001 AT4G17720.1 21798944
AT1G56330.1 Zm00001d031612_P001 AT4G17720.1 21798944
AT1G56330.1 Zm00001d035920_P002 AT4G17720.1 21798944
AT1G56330.1 Zm00001d045559_P002 AT4G17720.1 21798944
AT1G56330.1 Zm00001d046215_P001 AT4G17720.1 21798944
AT1G56330.1 Zm00001d046992_P001 AT4G17720.1 21798944
AT1G56330.1 Zm00001d051524_P002 AT4G17720.1 21798944
AT1G56330.1 Zm00001d054082_P001 AT4G17720.1 21798944
AT1G56330.1 Zm00001d010603_P002 AT5G01640.1 21798944
AT1G56330.1 Zm00001d043018_P001 AT5G01640.1 21798944
AT1G56330.1 Zm00001d052322_P001 AT5G01640.1 21798944
AT4G02080.1 Zm00001d002027_P002 AT1G22920.1 21798944
AT4G02080.1 Zm00001d002027_P002 AT1G71230.1 21798944
AT4G02080.1 Zm00001d037747_P001 AT3G13720.1 21798944
AT4G02080.1 Zm00001d039455_P002 AT3G13720.1 21798944
AT4G02080.1 Zm00001d045580_P001 AT4G25680.1 21798944
AT4G02080.1 Zm00001d010603_P002 AT5G01640.1 21798944
AT4G02080.1 Zm00001d043018_P001 AT5G01640.1 21798944
AT4G02080.1 Zm00001d052322_P001 AT5G01640.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d040752_P001 Maize endoplasmic reticulum, extracellular 59.02 100.0
EES00709 Sorghum endoplasmic reticulum, extracellular 59.02 100.0
TraesCS3A01G193800.1 Wheat golgi 58.41 98.96
TraesCS3B01G221700.1 Wheat endoplasmic reticulum, extracellular 58.41 98.96
TraesCS3D01G196200.1 Wheat endoplasmic reticulum, extracellular 58.1 98.45
Os01t0338000-01 Rice plasma membrane 58.1 98.45
AT4G02080.1 Thale cress endoplasmic reticulum 56.57 95.85
VIT_05s0077g01230.t01 Wine grape endoplasmic reticulum, extracellular 56.27 95.34
CDY22027 Canola endoplasmic reticulum, extracellular 56.27 95.34
CDX90955 Canola endoplasmic reticulum, extracellular 56.27 95.34
Bra000895.1-P Field mustard endoplasmic reticulum, extracellular 56.27 95.34
CDX91807 Canola endoplasmic reticulum, extracellular 55.96 94.82
KRH68446 Soybean endoplasmic reticulum 55.96 94.82
Solyc01g079540.2.1 Tomato plastid 55.66 94.3
VIT_07s0005g01330.t01 Wine grape endoplasmic reticulum, extracellular 55.66 94.3
Zm00001d040278_P001 Maize extracellular 55.66 94.3
PGSC0003DMT400023327 Potato endoplasmic reticulum, extracellular 55.66 94.3
KRG96730 Soybean endoplasmic reticulum 55.66 94.3
AT3G62560.1 Thale cress endoplasmic reticulum 55.35 93.78
Solyc06g009660.2.1 Tomato extracellular 55.35 93.78
PGSC0003DMT400018800 Potato cytosol 55.35 93.78
KRH50759 Soybean endoplasmic reticulum 55.05 93.26
AT1G56330.1 Thale cress endoplasmic reticulum 54.74 92.75
KRH02329 Soybean endoplasmic reticulum, extracellular 54.74 92.75
KRG92955 Soybean endoplasmic reticulum, extracellular 54.43 92.23
KRH11980 Soybean endoplasmic reticulum, extracellular 54.43 92.23
KRH33832 Soybean endoplasmic reticulum 54.43 92.23
KRH37008 Soybean endoplasmic reticulum 54.43 92.23
KRH50760 Soybean endoplasmic reticulum 53.82 91.19
PGSC0003DMT400007183 Potato endoplasmic reticulum, golgi 53.82 91.19
Solyc01g100350.2.1 Tomato plastid 53.82 91.19
CDY65544 Canola endoplasmic reticulum, extracellular 53.21 91.1
CDY59269 Canola endoplasmic reticulum, extracellular 54.13 90.77
CDY41713 Canola endoplasmic reticulum, extracellular 54.13 90.77
Bra027937.1-P Field mustard endoplasmic reticulum, extracellular 54.13 90.77
KRH02328 Soybean endoplasmic reticulum 53.52 90.67
Bra038169.1-P Field mustard endoplasmic reticulum, extracellular 53.82 90.26
CDY39001 Canola endoplasmic reticulum, extracellular 53.82 90.26
Bra018576.1-P Field mustard endoplasmic reticulum, golgi 53.21 90.16
CDX95000 Canola endoplasmic reticulum, golgi 53.21 90.16
CDX93520 Canola endoplasmic reticulum, golgi 53.21 90.16
CDY31105 Canola endoplasmic reticulum, golgi 52.91 89.64
CDY32159 Canola endoplasmic reticulum, golgi 52.6 89.12
AT1G09180.1 Thale cress extracellular 51.99 88.08
VIT_16s0013g00170.t01 Wine grape cytosol 29.05 87.96
PGSC0003DMT400068658 Potato endoplasmic reticulum, extracellular 51.68 87.56
Solyc01g060130.2.1 Tomato endoplasmic reticulum, extracellular 51.38 87.05
AT1G02620.1 Thale cress endoplasmic reticulum 30.28 81.15
VIT_05s0165g00230.t01 Wine grape cytosol 40.67 78.24
Zm00001d049068_P001 Maize cytosol 46.18 77.84
HORVU3Hr1G045150.3 Barley plastid 51.07 74.89
VIT_14s0060g01340.t01 Wine grape endoplasmic reticulum, extracellular 48.62 67.09
VIT_02s0033g01130.t01 Wine grape cytosol 25.69 47.19
Bra036294.1-P Field mustard endoplasmic reticulum 55.96 44.85
CDY07095 Canola endoplasmic reticulum 55.96 44.74
Zm00001d028112_P001 Maize extracellular 18.96 33.7
Zm00001d048155_P001 Maize extracellular 18.96 33.7
Zm00001d017945_P002 Maize mitochondrion 17.43 29.23
Zm00001d000379_P002 Maize mitochondrion 18.96 27.43
Protein Annotations
EntrezGene:100279736MapMan:22.4.2.1Gene3D:3.40.50.300UniProt:A0A1D6FI64ProteinID:AQK91493.1GO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0006810GO:GO:0006886GO:GO:0008150InterPro:IPR006687InterPro:P-loop_NTPasePFAM:PF00025
PRINTS:PR00328PFscan:PS51422PANTHER:PTHR11711PANTHER:PTHR11711:SF165SMART:SM00177SMART:SM00178
SUPFAM:SSF52540InterPro:Small_GTPase_ARF/SARInterPro:Small_GTPase_SAR1UniParc:UPI0008443853EnsemblPlantsGene:Zm00001d009211EnsemblPlants:Zm00001d009211_P001
EnsemblPlants:Zm00001d009211_T001SEG:seg::::
Description
GTP-binding protein SAR1A
Coordinates
chr8:-:43207255..43210029
Molecular Weight (calculated)
36823.3 Da
IEP (calculated)
9.744
GRAVY (calculated)
-0.392
Length
327 amino acids
Sequence
(BLAST)
001: MVQSKRVYMQ HSLASLRLEW SRHPDPAAAV NRHAPILPQQ TQHKQTGRDS DPLVTHPRYP LSLGFLSHHQ PPSRLSPPPP ALGRRDEGRR EAPAGRGGKR
101: SSRAGGEMFL WDWFYGVLAS LGLWQKEAKI LFLGLDNAGK TTLLHMLKDE RLVQHQPTQH PTSEELSIGK IKFKAFDLGG HQIARRVWKD YYAKVELDSS
201: VLIIRAVWSD LCSSLAPLIK NVDAVVYLVD AYDKERFAES KKELDALLSD DSLANVPFLI LGNKIDIPYA ASEEELRYHL GLSNFTTGKG KVNLGDSNVR
301: PLEVFMCSVV RKMGYGDGFK WVSQYIK
Best Arabidopsis Sequence Match ( AT4G02080.1 )
(BLAST)
001: MFMIDWFYGV LASLGLWQKE AKILFLGLDN AGKTTLLHML KDERLVQHQP TQHPTSEELS IGKIKFKAFD LGGHQIARRV WKDYYAKVDA VVYLVDAYDK
101: ERFAESKKEL DALLSDESLA SVPFLILGNK IDIPYAASED ELRYHLGLSN FTTGKGKVNL TDSNVRPLEV FMCSIVRKMG YGEGFKWVSQ YIK
Arabidopsis Description
SAR1ASAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5S8]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.