Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026150_P001 | Maize | cytosol | 100.0 | 100.0 |
| Zm00001d031493_P001 | Maize | cytosol, mitochondrion, plastid | 93.75 | 69.23 |
| Zm00001d026206_P001 | Maize | cytosol, nucleus, plastid | 87.5 | 66.88 |
| EES12769 | Sorghum | cytosol | 84.17 | 64.33 |
| Zm00001d002475_P001 | Maize | extracellular | 80.42 | 61.47 |
| Os04t0594400-01 | Rice | plasma membrane | 73.75 | 56.37 |
| TraesCS2D01G444000.1 | Wheat | extracellular | 73.33 | 55.87 |
| TraesCS2B01G466100.1 | Wheat | extracellular | 73.75 | 55.84 |
| TraesCS2A01G445100.1 | Wheat | extracellular | 73.33 | 55.52 |
| CDY01473 | Canola | nucleus | 37.92 | 45.96 |
| CDX90455 | Canola | cytosol | 37.08 | 42.79 |
| Bra012647.1-P | Field mustard | cytosol | 37.08 | 42.79 |
| PGSC0003DMT400008196 | Potato | cytosol, mitochondrion, nucleus | 48.75 | 42.09 |
| VIT_02s0012g01860.t01 | Wine grape | cytosol | 49.17 | 41.84 |
| Solyc03g097110.2.1 | Tomato | nucleus | 48.33 | 41.73 |
| VIT_16s0039g01860.t01 | Wine grape | cytosol, nucleus, plastid | 47.92 | 41.52 |
| Solyc08g076530.2.1 | Tomato | plastid | 48.33 | 41.28 |
| PGSC0003DMT400038377 | Potato | cytosol | 48.33 | 41.28 |
| KRH74377 | Soybean | endoplasmic reticulum | 47.5 | 40.86 |
| KRH39571 | Soybean | nucleus | 47.08 | 40.36 |
| GSMUA_Achr8P14700_001 | Banana | plastid | 49.58 | 39.02 |
| Bra040177.1-P | Field mustard | nucleus | 48.75 | 38.74 |
| CDX78795 | Canola | nucleus | 48.75 | 38.61 |
| CDX70721 | Canola | cytosol | 41.67 | 38.31 |
| CDY01477 | Canola | cytosol | 48.33 | 38.28 |
| AT5G46870.1 | Thale cress | nucleus | 46.67 | 37.97 |
| CDY60787 | Canola | nucleus | 47.92 | 37.95 |
| CDX78713 | Canola | cytosol | 41.25 | 37.93 |
| Bra006373.1-P | Field mustard | cytosol | 41.25 | 37.93 |
| CDX90453 | Canola | cytosol | 48.75 | 37.86 |
| Bra012646.1-P | Field mustard | nucleus | 49.17 | 37.82 |
| GSMUA_Achr5P14070_001 | Banana | cytosol, nucleus, plastid | 43.75 | 37.77 |
| AT4G17720.1 | Thale cress | cytosol, nucleus, plastid | 49.17 | 37.7 |
| AT5G16840.2 | Thale cress | nucleus | 40.83 | 37.69 |
| KRH24024 | Soybean | nucleus | 45.83 | 37.67 |
| Zm00001d045559_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 43.33 | 37.41 |
| CDX69415 | Canola | cytosol | 40.42 | 37.31 |
| Bra008589.1-P | Field mustard | cytosol | 40.42 | 37.02 |
| Zm00001d054082_P001 | Maize | cytosol | 42.08 | 35.69 |
| Zm00001d046215_P001 | Maize | cytosol | 47.5 | 35.62 |
| Bra023585.1-P | Field mustard | nucleus | 37.5 | 35.57 |
| Zm00001d033766_P002 | Maize | cytosol, nucleus, plastid | 41.25 | 34.98 |
| Zm00001d013419_P001 | Maize | cytosol, nucleus, plastid | 40.42 | 34.28 |
| CDY33486 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 46.67 | 33.63 |
| Bra024988.1-P | Field mustard | vacuole | 46.67 | 33.63 |
| CDX77703 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 46.67 | 33.43 |
| CDY01476 | Canola | cytosol | 19.17 | 32.17 |
| Zm00001d046992_P001 | Maize | cytosol | 43.33 | 31.8 |
| Zm00001d035920_P002 | Maize | extracellular, vacuole | 44.17 | 30.64 |
| CDY16974 | Canola | plastid | 40.42 | 30.5 |
| PGSC0003DMT400069547 | Potato | nucleus | 42.5 | 30.0 |
| Zm00001d051524_P002 | Maize | nucleus | 49.17 | 29.28 |
| CDX85485 | Canola | plastid | 37.92 | 28.89 |
| Solyc06g072770.2.1 | Tomato | nucleus | 43.33 | 28.57 |
| Zm00001d014267_P001 | Maize | nucleus | 48.33 | 27.49 |
| Zm00001d013271_P003 | Maize | cytosol | 32.08 | 27.4 |
| Zm00001d053093_P001 | Maize | cytosol, plastid | 30.42 | 23.03 |
| Zm00001d026425_P003 | Maize | cytosol | 22.08 | 21.72 |
| CDY38083 | Canola | nucleus | 37.92 | 21.72 |
| Zm00001d002122_P007 | Maize | cytosol, nucleus, plastid | 20.83 | 20.08 |
| Zm00001d033453_P001 | Maize | cytosol | 27.08 | 19.35 |
Protein Annotations
| EnsemblPlants:Zm00001d031612_P001 | EnsemblPlants:Zm00001d031612_T001 | EnsemblPlantsGene:Zm00001d031612 | PANTHER:PTHR44136 | PANTHER:PTHR44136:SF4 | ProteinID:AQK45729.1 |
| ProteinID:ONM03209.1 | UniParc:UPI000843BF40 | UniProt:A0A1D6JD26 | MapMan:35.1 | : | : |
Description
Binding partner of ACD11 1
Coordinates
chr1:-:196177002..196177950
Molecular Weight (calculated)
25849.9 Da
IEP (calculated)
6.689
GRAVY (calculated)
-0.252
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVIVTPAND YELPASVLAA LEPKDTKPYA LQKAEDIVGT MLAKGFILGR DALDKAKALD EKHQLTSTAT ARVSSFDKRI GLSEKISVGT SVVNDKVKEM
101: DQKYQVSEKT KSALAAAEQS VLTVGSAIMK NMYVLTGAAW VTGAFSKVTS AANDVGAKAK EKIAVEQEDK NAEGGPGQAN ISEIPAAHRE LDCEFANIHV
201: SETSEDVPMS SVTVPLLQMR SPAWPLHQLK FLKNQKLHRD
101: DQKYQVSEKT KSALAAAEQS VLTVGSAIMK NMYVLTGAAW VTGAFSKVTS AANDVGAKAK EKIAVEQEDK NAEGGPGQAN ISEIPAAHRE LDCEFANIHV
201: SETSEDVPMS SVTVPLLQMR SPAWPLHQLK FLKNQKLHRD
001: MTMTTVKVSN VSLGATDRDL KEFFSFSGDI LYLETQSETE RTKLAYVTFK DLQGAETAVL LSGATIVDSS VIVSMAPDYQ LSPEALASLE PKDSNKSPKA
101: GDSVLRKAED VVSSMLAKGF ILGKDAIAKA KSVDEKHQLT STASAKVASF DKKIGFTDKI NTGTVVVGEK VREVDQKYQV SEKTKSAIAA AEQTVSNAGS
201: AIMKNRYVLT GATWVTGAFN KVAKAAEEVG QKAKEKVGMA EEEDKRKVVD EFARVHLSES PKAASSTQEA ERESKLSESP EAKKDSEHLE PQSKPLQQQS
301: PPPMASAPAP AQP
101: GDSVLRKAED VVSSMLAKGF ILGKDAIAKA KSVDEKHQLT STASAKVASF DKKIGFTDKI NTGTVVVGEK VREVDQKYQV SEKTKSAIAA AEQTVSNAGS
201: AIMKNRYVLT GATWVTGAFN KVAKAAEEVG QKAKEKVGMA EEEDKRKVVD EFARVHLSES PKAASSTQEA ERESKLSESP EAKKDSEHLE PQSKPLQQQS
301: PPPMASAPAP AQP
Arabidopsis Description
Putative RRM-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8LA96]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.