Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006373.1-P | Field mustard | cytosol | 91.3 | 88.51 |
| Bra008589.1-P | Field mustard | cytosol | 88.14 | 85.11 |
| AT5G16840.2 | Thale cress | nucleus | 87.35 | 85.0 |
| CDX85485 | Canola | plastid | 98.02 | 78.73 |
| GSMUA_Achr9P23330_001 | Banana | nucleus, peroxisome, plastid | 58.5 | 60.66 |
| Os06t0112400-01 | Rice | plasma membrane | 60.87 | 59.0 |
| EER89059 | Sorghum | cytosol | 62.06 | 58.36 |
| HORVU7Hr1G003710.1 | Barley | cytosol | 59.29 | 57.03 |
| VIT_16s0039g01860.t01 | Wine grape | cytosol, nucleus, plastid | 62.06 | 56.68 |
| PGSC0003DMT400008196 | Potato | cytosol, mitochondrion, nucleus | 61.66 | 56.12 |
| Solyc03g097110.2.1 | Tomato | nucleus | 61.26 | 55.76 |
| TraesCS7D01G027100.1 | Wheat | plastid | 58.5 | 55.64 |
| TraesCS4A01G458600.1 | Wheat | cytosol, nucleus, plastid | 58.5 | 55.64 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular, nucleus | 60.47 | 55.04 |
| Zm00001d045559_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 60.08 | 54.68 |
| TraesCS7A01G030900.2 | Wheat | plastid | 58.5 | 46.98 |
| KRH24024 | Soybean | nucleus | 54.15 | 46.92 |
| Bra040177.1-P | Field mustard | nucleus | 54.94 | 46.03 |
| Zm00001d035920_P002 | Maize | extracellular, vacuole | 62.06 | 45.38 |
| GSMUA_Achr5P14070_001 | Banana | cytosol, nucleus, plastid | 49.41 | 44.96 |
| Bra012646.1-P | Field mustard | nucleus | 54.94 | 44.55 |
| PGSC0003DMT400069547 | Potato | nucleus | 58.5 | 43.53 |
| GSMUA_Achr8P14700_001 | Banana | plastid | 51.38 | 42.62 |
| Zm00001d002475_P001 | Maize | extracellular | 52.57 | 42.36 |
| Zm00001d054082_P001 | Maize | cytosol | 47.04 | 42.05 |
| EES12769 | Sorghum | cytosol | 51.78 | 41.72 |
| Os04t0594400-01 | Rice | plasma membrane | 51.38 | 41.4 |
| Zm00001d026206_P001 | Maize | cytosol, nucleus, plastid | 51.38 | 41.4 |
| Bra012647.1-P | Field mustard | cytosol | 33.99 | 41.35 |
| TraesCS2D01G444000.1 | Wheat | extracellular | 50.99 | 40.95 |
| TraesCS2A01G445100.1 | Wheat | extracellular | 50.99 | 40.69 |
| Solyc06g072770.2.1 | Tomato | nucleus | 58.1 | 40.38 |
| TraesCS2B01G466100.1 | Wheat | extracellular | 50.59 | 40.38 |
| Bra039914.1-P | Field mustard | cytosol | 41.9 | 40.3 |
| Bra024988.1-P | Field mustard | vacuole | 52.96 | 40.24 |
| Bra019660.1-P | Field mustard | cytosol | 37.15 | 38.52 |
| Bra016705.1-P | Field mustard | nucleus | 36.76 | 38.11 |
| Zm00001d046992_P001 | Maize | cytosol | 48.62 | 37.61 |
| Zm00001d026150_P001 | Maize | cytosol | 35.57 | 37.5 |
| Zm00001d031612_P001 | Maize | cytosol | 35.57 | 37.5 |
| Os04t0624800-01 | Rice | nucleus | 52.57 | 35.37 |
| Bra001017.1-P | Field mustard | cytosol, nucleus, plastid | 33.2 | 33.33 |
| OQU85574 | Sorghum | nucleus | 50.99 | 32.99 |
| TraesCS6D01G249000.1 | Wheat | nucleus, plastid | 48.22 | 31.94 |
| Zm00001d051524_P002 | Maize | nucleus | 50.2 | 31.51 |
| TraesCS6A01G265600.1 | Wheat | extracellular | 49.01 | 31.23 |
| Zm00001d031493_P001 | Maize | cytosol, mitochondrion, plastid | 39.53 | 30.77 |
| TraesCS6B01G292900.1 | Wheat | endoplasmic reticulum, extracellular | 47.83 | 30.48 |
| Zm00001d014267_P001 | Maize | nucleus | 49.8 | 29.86 |
| Zm00001d046215_P001 | Maize | cytosol | 35.18 | 27.81 |
Protein Annotations
| EnsemblPlants:Bra023585.1 | EnsemblPlants:Bra023585.1-P | EnsemblPlantsGene:Bra023585 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | PANTHER:PTHR44136 | PANTHER:PTHR44136:SF6 | PFAM:PF00076 | PFscan:PS50102 | SEG:seg |
| SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0002543058 | UniProt:M4E482 | MapMan:35.1 | : |
Description
AT5G16840 (E=3e-111) BPA1 | BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductase
Coordinates
chrA02:+:4071086..4072919
Molecular Weight (calculated)
26255.7 Da
IEP (calculated)
4.983
GRAVY (calculated)
-0.238
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIRSVKVGN LSSGATEHDI KEFFSFSGEV ESIDIQGDEH SAYVTFKDPQ GAETAVLLSG ASIADQSVVI EMAPNYTPPA APHAETQSGG GGVAESVVQK
101: AEDVVSTMLA KGFILGKDAV GKAKAFDEKL GFTSTATAGV ASIDQKIGLS QKITAGTSLV TEKIKGVDQS FQVTERTKSA FATAEQTVSS AGTAVMKNRF
201: VLTGVSWAAG AFNRVAKAAG EGGQKTKEKV EAEQPPQPSQ SEQQAPEGYS PLH
101: AEDVVSTMLA KGFILGKDAV GKAKAFDEKL GFTSTATAGV ASIDQKIGLS QKITAGTSLV TEKIKGVDQS FQVTERTKSA FATAEQTVSS AGTAVMKNRF
201: VLTGVSWAAG AFNRVAKAAG EGGQKTKEKV EAEQPPQPSQ SEQQAPEGYS PLH
001: MAVRSVKVGN LSSGATEHDI KEFFSFSGEV ESIDIQSNEH SAYVTFKETQ GAETAVLLSG ASIADQSVII ELAPNYSPPA APHAETQSSG AESVVQKAED
101: VVSSMLAKGF ILGKDAVGKA KAFDEKHGFT STATAGVASL DQKIGLSQKL TAGTSLVNEK IKAVDQNFQV TERTKSVYAA AEQTVSSAGS AVMKNRYVLT
201: GVSWAAGAFN RVAQAAGEVG QKTKEKVEAE QPSQPAQSQQ QLPEGYSPIH SSEYSKN
101: VVSSMLAKGF ILGKDAVGKA KAFDEKHGFT STATAGVASL DQKIGLSQKL TAGTSLVNEK IKAVDQNFQV TERTKSVYAA AEQTVSSAGS AVMKNRYVLT
201: GVSWAAGAFN RVAQAAGEVG QKTKEKVEAE QPSQPAQSQQ QLPEGYSPIH SSEYSKN
Arabidopsis Description
BPA1binding partner of acd11 1 [Source:TAIR;Acc:AT5G16840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.