Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- endoplasmic reticulum 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER89059 | Sorghum | cytosol | 91.01 | 94.05 |
| Os06t0112400-01 | Rice | plasma membrane | 83.45 | 88.89 |
| HORVU7Hr1G003710.1 | Barley | cytosol | 81.65 | 86.31 |
| TraesCS7D01G027100.1 | Wheat | plastid | 81.65 | 85.34 |
| TraesCS4A01G458600.1 | Wheat | cytosol, nucleus, plastid | 80.94 | 84.59 |
| GSMUA_Achr9P23330_001 | Banana | nucleus, peroxisome, plastid | 67.27 | 76.64 |
| Zm00001d035920_P002 | Maize | extracellular, vacuole | 89.93 | 72.25 |
| TraesCS7A01G030900.2 | Wheat | plastid | 81.65 | 72.06 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular, nucleus | 68.7 | 68.7 |
| CDY01476 | Canola | cytosol | 32.37 | 62.94 |
| VIT_16s0039g01860.t01 | Wine grape | cytosol, nucleus, plastid | 61.15 | 61.37 |
| VIT_02s0012g01860.t01 | Wine grape | cytosol | 62.23 | 61.35 |
| Solyc03g097110.2.1 | Tomato | nucleus | 61.15 | 61.15 |
| PGSC0003DMT400008196 | Potato | cytosol, mitochondrion, nucleus | 60.79 | 60.79 |
| Bra023585.1-P | Field mustard | nucleus | 54.68 | 60.08 |
| KRH74377 | Soybean | endoplasmic reticulum | 59.71 | 59.5 |
| KRH39571 | Soybean | nucleus | 59.35 | 58.93 |
| AT5G16840.2 | Thale cress | nucleus | 55.04 | 58.85 |
| Bra006373.1-P | Field mustard | cytosol | 55.04 | 58.62 |
| CDX78713 | Canola | cytosol | 55.04 | 58.62 |
| Solyc08g076530.2.1 | Tomato | plastid | 58.63 | 58.01 |
| CDX70721 | Canola | cytosol | 53.96 | 57.47 |
| PGSC0003DMT400038377 | Potato | cytosol | 57.91 | 57.3 |
| CDX69415 | Canola | cytosol | 52.88 | 56.54 |
| Bra008589.1-P | Field mustard | cytosol | 52.88 | 56.11 |
| CDY01477 | Canola | cytosol | 58.63 | 53.8 |
| CDX78795 | Canola | nucleus | 57.91 | 53.14 |
| Bra012646.1-P | Field mustard | nucleus | 59.35 | 52.88 |
| CDX90453 | Canola | cytosol | 58.63 | 52.75 |
| Bra040177.1-P | Field mustard | nucleus | 57.19 | 52.65 |
| CDY60787 | Canola | nucleus | 57.19 | 52.48 |
| AT4G17720.1 | Thale cress | cytosol, nucleus, plastid | 58.99 | 52.4 |
| Zm00001d033766_P002 | Maize | cytosol, nucleus, plastid | 52.88 | 51.94 |
| AT5G46870.1 | Thale cress | nucleus | 55.04 | 51.86 |
| Zm00001d013419_P001 | Maize | cytosol, nucleus, plastid | 52.16 | 51.24 |
| Zm00001d026206_P001 | Maize | cytosol, nucleus, plastid | 57.19 | 50.64 |
| Zm00001d002475_P001 | Maize | extracellular | 56.83 | 50.32 |
| CDX85485 | Canola | plastid | 55.04 | 48.57 |
| Zm00001d054082_P001 | Maize | cytosol | 48.56 | 47.7 |
| KRH24024 | Soybean | nucleus | 49.28 | 46.92 |
| CDY16974 | Canola | plastid | 53.6 | 46.86 |
| CDY01473 | Canola | nucleus | 33.09 | 46.46 |
| PGSC0003DMT400069547 | Potato | nucleus | 55.76 | 45.59 |
| CDX77703 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 54.32 | 45.07 |
| Bra024988.1-P | Field mustard | vacuole | 53.96 | 45.05 |
| CDY33486 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 53.6 | 44.74 |
| Bra012647.1-P | Field mustard | cytosol | 33.09 | 44.23 |
| CDX90455 | Canola | cytosol | 33.09 | 44.23 |
| Zm00001d026150_P001 | Maize | cytosol | 37.41 | 43.33 |
| Zm00001d031612_P001 | Maize | cytosol | 37.41 | 43.33 |
| Solyc06g072770.2.1 | Tomato | nucleus | 56.12 | 42.86 |
| Zm00001d046992_P001 | Maize | cytosol | 50.0 | 42.51 |
| Zm00001d013271_P003 | Maize | cytosol | 41.37 | 40.93 |
| Zm00001d053093_P001 | Maize | cytosol, plastid | 44.6 | 39.12 |
| Zm00001d031493_P001 | Maize | cytosol, mitochondrion, plastid | 44.24 | 37.85 |
| Zm00001d026425_P003 | Maize | cytosol | 32.01 | 36.48 |
| CDY38083 | Canola | nucleus | 54.68 | 36.28 |
| Zm00001d051524_P002 | Maize | nucleus | 51.8 | 35.73 |
| Zm00001d002122_P007 | Maize | cytosol, nucleus, plastid | 30.58 | 34.14 |
| Zm00001d014267_P001 | Maize | nucleus | 50.72 | 33.41 |
| Zm00001d046215_P001 | Maize | cytosol | 34.53 | 30.0 |
| Zm00001d033453_P001 | Maize | cytosol | 24.82 | 20.54 |
Protein Annotations
| EnsemblPlants:Zm00001d045559_P002 | EnsemblPlants:Zm00001d045559_T002 | EnsemblPlantsGene:Zm00001d045559 | Gene3D:3.30.70.330 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | InterPro:RBD_domain_sf |
| InterPro:RRM_dom | PANTHER:PTHR32343 | PANTHER:PTHR32343:SF10 | PFscan:PS50102 | ProteinID:AQL02600.1 | SEG:seg |
| SUPFAM:SSF54928 | UniParc:UPI0008450A0B | UniProt:A0A1D6NWZ6 | MapMan:35.1 | : | : |
Description
Binding partner of ACD11 1
Coordinates
chr9:+:26672469..26675973
Molecular Weight (calculated)
29154.6 Da
IEP (calculated)
7.906
GRAVY (calculated)
-0.106
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAVEVPVE APVRTVKVTN VSLSATVQDI KEFFSFSGDI DHVEMQRFLV SLYFGSGDEW SQVAYVTFKD AQGAETALLL SGATIVDLSV IIAPAPEYQP
101: PPTASAPPMS GTRVPVGGGD NNVVHKAEDV VSTMLAKGFV LGKDAVGKAK AFDEKHGFTS TAGATVASID KKIGLTDKIT TGTSLVSGKV KEMDQKFQVS
201: DKTKSALAAA EQKVSSAGSA IMKNRYVFTG ASWVTSAFNK VAKTATDVGT MTKEKMAAEE HHKGSGPSSG GHSYTPIR
101: PPTASAPPMS GTRVPVGGGD NNVVHKAEDV VSTMLAKGFV LGKDAVGKAK AFDEKHGFTS TAGATVASID KKIGLTDKIT TGTSLVSGKV KEMDQKFQVS
201: DKTKSALAAA EQKVSSAGSA IMKNRYVFTG ASWVTSAFNK VAKTATDVGT MTKEKMAAEE HHKGSGPSSG GHSYTPIR
001: MASQVRSVKV GNLSSGATEH DIKEFFSFSG EVESIDIQSS NEHSAYVTFK ETQGAETAVL LSGASIADQS VIIELAPNYS PPAAPHAETQ SSGAESVVQK
101: AEDVVSSMLA KGFILGKDAV GKAKAFDEKH GFTSTATAGV ASLDQKIGLS QKLTAGTSLV NEKIKAVDQN FQVTERTKSV YAAAEQTVSS AGSAVMKNRY
201: VLTGVSWAAG AFNRVAQAAG EVGQKTKEKV EAEQPSQPAQ SQQQLPEGYS PIHSSEYSKN
101: AEDVVSSMLA KGFILGKDAV GKAKAFDEKH GFTSTATAGV ASLDQKIGLS QKLTAGTSLV NEKIKAVDQN FQVTERTKSV YAAAEQTVSS AGSAVMKNRY
201: VLTGVSWAAG AFNRVAQAAG EVGQKTKEKV EAEQPSQPAQ SQQQLPEGYS PIHSSEYSKN
Arabidopsis Description
BPA1binding partner of acd11 1 [Source:TAIR;Acc:AT5G16840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.