Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69415 | Canola | cytosol | 79.87 | 97.69 |
| CDX70721 | Canola | cytosol | 75.16 | 91.57 |
| CDX78713 | Canola | cytosol | 74.84 | 91.19 |
| AT5G16840.2 | Thale cress | nucleus | 70.75 | 86.54 |
| CDX85485 | Canola | plastid | 73.9 | 74.6 |
| GSMUA_Achr9P23330_001 | Banana | nucleus, peroxisome, plastid | 45.28 | 59.02 |
| PGSC0003DMT400008196 | Potato | cytosol, mitochondrion, nucleus | 51.26 | 58.63 |
| Os06t0112400-01 | Rice | plasma membrane | 48.11 | 58.62 |
| Solyc03g097110.2.1 | Tomato | nucleus | 50.94 | 58.27 |
| VIT_16s0039g01860.t01 | Wine grape | cytosol, nucleus, plastid | 50.31 | 57.76 |
| HORVU7Hr1G003710.1 | Barley | cytosol | 47.48 | 57.41 |
| CDY38083 | Canola | nucleus | 75.47 | 57.28 |
| EER89059 | Sorghum | cytosol | 48.43 | 57.25 |
| TraesCS4A01G458600.1 | Wheat | cytosol, nucleus, plastid | 47.48 | 56.77 |
| TraesCS7D01G027100.1 | Wheat | plastid | 47.48 | 56.77 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular, nucleus | 47.8 | 54.68 |
| CDY01476 | Canola | cytosol | 24.53 | 54.55 |
| Zm00001d045559_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 46.86 | 53.6 |
| KRH24024 | Soybean | nucleus | 44.97 | 48.97 |
| TraesCS7A01G030900.2 | Wheat | plastid | 47.48 | 47.94 |
| CDX78795 | Canola | nucleus | 45.6 | 47.85 |
| CDY60787 | Canola | nucleus | 44.97 | 47.19 |
| CDY01477 | Canola | cytosol | 44.34 | 46.53 |
| CDX90453 | Canola | cytosol | 44.34 | 45.63 |
| PGSC0003DMT400069547 | Potato | nucleus | 48.11 | 45.0 |
| GSMUA_Achr5P14070_001 | Banana | cytosol, nucleus, plastid | 39.31 | 44.96 |
| CDY01473 | Canola | nucleus | 27.67 | 44.44 |
| Zm00001d035920_P002 | Maize | extracellular, vacuole | 48.11 | 44.22 |
| CDX90455 | Canola | cytosol | 28.3 | 43.27 |
| Zm00001d026206_P001 | Maize | cytosol, nucleus, plastid | 42.45 | 42.99 |
| GSMUA_Achr8P14700_001 | Banana | plastid | 41.2 | 42.95 |
| EES12769 | Sorghum | cytosol | 42.14 | 42.68 |
| Zm00001d054082_P001 | Maize | cytosol | 37.74 | 42.4 |
| Os04t0594400-01 | Rice | plasma membrane | 41.82 | 42.36 |
| Zm00001d002475_P001 | Maize | extracellular | 41.82 | 42.36 |
| TraesCS2D01G444000.1 | Wheat | extracellular | 41.51 | 41.9 |
| Solyc06g072770.2.1 | Tomato | nucleus | 47.8 | 41.76 |
| TraesCS2A01G445100.1 | Wheat | extracellular | 41.51 | 41.64 |
| CDY33486 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 43.4 | 41.44 |
| TraesCS2B01G466100.1 | Wheat | extracellular | 41.2 | 41.32 |
| CDY60084 | Canola | cytosol, nucleus, plastid | 9.75 | 40.79 |
| CDY38176 | Canola | cytosol | 33.65 | 40.68 |
| Zm00001d031612_P001 | Maize | cytosol | 30.5 | 40.42 |
| Zm00001d026150_P001 | Maize | cytosol | 30.5 | 40.42 |
| CDX77703 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 42.14 | 40.0 |
| CDY25131 | Canola | cytosol, mitochondrion, nucleus, plastid | 33.33 | 39.85 |
| CDY49093 | Canola | cytosol | 30.5 | 39.59 |
| CDY62016 | Canola | nucleus | 28.93 | 39.32 |
| CDX96860 | Canola | nucleus | 29.25 | 38.11 |
| CDX84035 | Canola | nucleus | 29.25 | 38.11 |
| CDY01872 | Canola | cytosol, plastid | 33.96 | 38.03 |
| Zm00001d046992_P001 | Maize | cytosol | 38.68 | 37.61 |
| Os04t0624800-01 | Rice | nucleus | 41.51 | 35.11 |
| OQU85574 | Sorghum | nucleus | 41.82 | 34.02 |
| Zm00001d031493_P001 | Maize | cytosol, mitochondrion, plastid | 33.96 | 33.23 |
| TraesCS6D01G249000.1 | Wheat | nucleus, plastid | 38.68 | 32.2 |
| Zm00001d051524_P002 | Maize | nucleus | 40.25 | 31.76 |
| CDX74287 | Canola | cytosol | 25.16 | 31.75 |
| TraesCS6A01G265600.1 | Wheat | extracellular | 39.62 | 31.74 |
| CDX91958 | Canola | cytosol, nucleus, plastid | 24.84 | 31.35 |
| TraesCS6B01G292900.1 | Wheat | endoplasmic reticulum, extracellular | 38.68 | 30.98 |
| Zm00001d014267_P001 | Maize | nucleus | 39.94 | 30.09 |
| Zm00001d046215_P001 | Maize | cytosol | 28.62 | 28.44 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:A0A078FV95 | UniProt:A0A078FV95 | EnsemblPlants:CDY16974 | ProteinID:CDY16974 |
| ProteinID:CDY16974.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00094909001 |
| InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR44136 |
| PANTHER:PTHR44136:SF6 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0004EDFEEE |
| SEG:seg | : | : | : | : | : |
Description
BnaC09g41010DBnaC09g41010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FV95]
Coordinates
chrLK032068:-:658142..660835
Molecular Weight (calculated)
34185.3 Da
IEP (calculated)
9.989
GRAVY (calculated)
-0.488
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKPKKKKTE CNKKQRHFFS SIRNHINQYR SAFLVNLICV RKQSHTSLPR RQRRSTTSMA IRSVKVGNLS SGATEHDIKE FFSFSGEVET IDIQGGEHSA
101: YVTFKDPQGA ETAVLLSGAS IADQSVTIEL APNYTPPAAP HAETQSSGGG AAEGVVQKAE DVVSSMLAKG FILGKDAVGK AKAFDEKLGF TSTATAGVAS
201: IDQKIGLSQK FTAGTTLVND KIKEVDQSLQ VSERTKSAYA SVEQTVSSAG NAVMKNRYVL TGVSWAAGAF SRVAKAAGEV SQKTKEKVEA EHPPQPSQSQ
301: EQLPEGYAPI HSSEYSKK
101: YVTFKDPQGA ETAVLLSGAS IADQSVTIEL APNYTPPAAP HAETQSSGGG AAEGVVQKAE DVVSSMLAKG FILGKDAVGK AKAFDEKLGF TSTATAGVAS
201: IDQKIGLSQK FTAGTTLVND KIKEVDQSLQ VSERTKSAYA SVEQTVSSAG NAVMKNRYVL TGVSWAAGAF SRVAKAAGEV SQKTKEKVEA EHPPQPSQSQ
301: EQLPEGYAPI HSSEYSKK
001: MAVRSVKVGN LSSGATEHDI KEFFSFSGEV ESIDIQSNEH SAYVTFKETQ GAETAVLLSG ASIADQSVII ELAPNYSPPA APHAETQSSG AESVVQKAED
101: VVSSMLAKGF ILGKDAVGKA KAFDEKHGFT STATAGVASL DQKIGLSQKL TAGTSLVNEK IKAVDQNFQV TERTKSVYAA AEQTVSSAGS AVMKNRYVLT
201: GVSWAAGAFN RVAQAAGEVG QKTKEKVEAE QPSQPAQSQQ QLPEGYSPIH SSEYSKN
101: VVSSMLAKGF ILGKDAVGKA KAFDEKHGFT STATAGVASL DQKIGLSQKL TAGTSLVNEK IKAVDQNFQV TERTKSVYAA AEQTVSSAGS AVMKNRYVLT
201: GVSWAAGAFN RVAQAAGEVG QKTKEKVEAE QPSQPAQSQQ QLPEGYSPIH SSEYSKN
Arabidopsis Description
BPA1binding partner of acd11 1 [Source:TAIR;Acc:AT5G16840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.