Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70721 | Canola | cytosol | 54.42 | 87.36 |
| CDX78713 | Canola | cytosol | 54.42 | 87.36 |
| AT5G16840.2 | Thale cress | nucleus | 53.22 | 85.77 |
| CDX85485 | Canola | plastid | 64.44 | 85.71 |
| CDX69415 | Canola | cytosol | 52.03 | 83.85 |
| CDY16974 | Canola | plastid | 57.28 | 75.47 |
| GSMUA_Achr9P23330_001 | Banana | nucleus, peroxisome, plastid | 35.56 | 61.07 |
| Os06t0112400-01 | Rice | plasma membrane | 36.52 | 58.62 |
| EER89059 | Sorghum | cytosol | 37.23 | 57.99 |
| VIT_16s0039g01860.t01 | Wine grape | cytosol, nucleus, plastid | 37.71 | 57.04 |
| HORVU7Hr1G003710.1 | Barley | cytosol | 35.8 | 57.03 |
| PGSC0003DMT400008196 | Potato | cytosol, mitochondrion, nucleus | 37.71 | 56.83 |
| Solyc03g097110.2.1 | Tomato | nucleus | 37.47 | 56.47 |
| TraesCS4A01G458600.1 | Wheat | cytosol, nucleus, plastid | 35.32 | 55.64 |
| TraesCS7D01G027100.1 | Wheat | plastid | 35.32 | 55.64 |
| GSMUA_AchrUn_... | Banana | cytosol, extracellular, nucleus | 36.52 | 55.04 |
| Zm00001d045559_P002 | Maize | cytosol, endoplasmic reticulum, nucleus | 36.28 | 54.68 |
| CDY01476 | Canola | cytosol | 18.38 | 53.85 |
| TraesCS7A01G030900.2 | Wheat | plastid | 35.32 | 46.98 |
| KRH24024 | Soybean | nucleus | 32.7 | 46.92 |
| CDX78795 | Canola | nucleus | 33.89 | 46.86 |
| CDY60787 | Canola | nucleus | 33.41 | 46.2 |
| CDY01477 | Canola | cytosol | 32.94 | 45.54 |
| Zm00001d035920_P002 | Maize | extracellular, vacuole | 37.23 | 45.09 |
| CDX90453 | Canola | cytosol | 33.17 | 44.98 |
| GSMUA_Achr5P14070_001 | Banana | cytosol, nucleus, plastid | 29.83 | 44.96 |
| PGSC0003DMT400069547 | Potato | nucleus | 36.04 | 44.41 |
| GSMUA_Achr8P14700_001 | Banana | plastid | 31.5 | 43.28 |
| CDY01473 | Canola | nucleus | 20.29 | 42.93 |
| CDX90455 | Canola | cytosol | 21.0 | 42.31 |
| Zm00001d002475_P001 | Maize | extracellular | 31.5 | 42.04 |
| CDY33486 | Canola | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 33.17 | 41.74 |
| Os04t0594400-01 | Rice | plasma membrane | 31.26 | 41.72 |
| Zm00001d054082_P001 | Maize | cytosol | 28.16 | 41.7 |
| EES12769 | Sorghum | cytosol | 31.03 | 41.4 |
| Solyc06g072770.2.1 | Tomato | nucleus | 35.8 | 41.21 |
| Zm00001d026206_P001 | Maize | cytosol, nucleus, plastid | 30.79 | 41.08 |
| TraesCS2D01G444000.1 | Wheat | extracellular | 30.31 | 40.32 |
| CDX77703 | Canola | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 32.22 | 40.3 |
| TraesCS2A01G445100.1 | Wheat | extracellular | 30.31 | 40.06 |
| CDY38176 | Canola | cytosol | 25.06 | 39.92 |
| TraesCS2B01G466100.1 | Wheat | extracellular | 30.07 | 39.75 |
| CDY60084 | Canola | cytosol, nucleus, plastid | 7.16 | 39.47 |
| CDY62016 | Canola | nucleus | 21.96 | 39.32 |
| CDY49093 | Canola | cytosol | 22.91 | 39.18 |
| CDY25131 | Canola | cytosol, mitochondrion, nucleus, plastid | 24.82 | 39.1 |
| CDX96860 | Canola | nucleus | 22.2 | 38.11 |
| CDY01872 | Canola | cytosol, plastid | 25.78 | 38.03 |
| Zm00001d026150_P001 | Maize | cytosol | 21.72 | 37.92 |
| Zm00001d031612_P001 | Maize | cytosol | 21.72 | 37.92 |
| CDX84035 | Canola | nucleus | 21.96 | 37.7 |
| Zm00001d046992_P001 | Maize | cytosol | 29.12 | 37.31 |
| Os04t0624800-01 | Rice | nucleus | 31.03 | 34.57 |
| CDX74287 | Canola | cytosol | 19.81 | 32.94 |
| OQU85574 | Sorghum | nucleus | 30.55 | 32.74 |
| CDX91958 | Canola | cytosol, nucleus, plastid | 19.57 | 32.54 |
| TraesCS6D01G249000.1 | Wheat | nucleus, plastid | 28.64 | 31.41 |
| Zm00001d051524_P002 | Maize | nucleus | 30.07 | 31.27 |
| Zm00001d031493_P001 | Maize | cytosol, mitochondrion, plastid | 23.87 | 30.77 |
| TraesCS6A01G265600.1 | Wheat | extracellular | 29.12 | 30.73 |
| TraesCS6B01G292900.1 | Wheat | endoplasmic reticulum, extracellular | 28.88 | 30.48 |
| Zm00001d014267_P001 | Maize | nucleus | 29.83 | 29.62 |
| Zm00001d046215_P001 | Maize | cytosol | 21.24 | 27.81 |
Protein Annotations
| Gene3D:3.30.70.330 | MapMan:35.1 | GO:A0A078HMQ2 | UniProt:A0A078HMQ2 | EnsemblPlants:CDY38083 | ProteinID:CDY38083 |
| ProteinID:CDY38083.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00065350001 |
| InterPro:IPR000504 | InterPro:IPR012677 | InterPro:Nucleotide-bd_a/b_plait_sf | PFAM:PF00076 | PFscan:PS50102 | PANTHER:PTHR44136 |
| PANTHER:PTHR44136:SF6 | InterPro:RBD_domain_sf | InterPro:RRM_dom | SMART:SM00360 | SUPFAM:SSF54928 | UniParc:UPI0004EE1052 |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g06900DBnaC02g06900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HMQ2]
Coordinates
chrLK032416:-:32302..35649
Molecular Weight (calculated)
44896.9 Da
IEP (calculated)
8.712
GRAVY (calculated)
-0.353
Length
419 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVGFTSFLE SSYVSPVLIS VGYRQVKPGS ALGTRSSDGI NEAEEGINSG ADPENPGGYL LRRIPTRRRF LLPPTMIRPE IESQLPDLGN SSSRISTSRG
101: EIEEDGGRVR FNRRNATPTP HTREVSLEKA FQDALPFSSV HINLEVRFLL NLRYKAITTS QRRRSATSMA VRSVKVGNLS SGAKEHDIKE FFSFSGEVES
201: IDIQSNEHSA YVTFKDPQGA ETAVLLSGAS IADQSVVIEM APNYTPPAAP HAETQSGGVA ESVVQKAEDV VSTMLAKGFI LGKDAVGKAK AFDEKLGFTS
301: TATAGVASID QKIGLSQKIT AGTSLVTEKI KGVDQSFQVT ERTKSAFATA EQTVSSAGTA VMKNRFVLTG VSWAAGAFNR VAKAAGEVGQ KTKEKVEAEQ
401: PPQPSQSEQK PPEGYSPLH
101: EIEEDGGRVR FNRRNATPTP HTREVSLEKA FQDALPFSSV HINLEVRFLL NLRYKAITTS QRRRSATSMA VRSVKVGNLS SGAKEHDIKE FFSFSGEVES
201: IDIQSNEHSA YVTFKDPQGA ETAVLLSGAS IADQSVVIEM APNYTPPAAP HAETQSGGVA ESVVQKAEDV VSTMLAKGFI LGKDAVGKAK AFDEKLGFTS
301: TATAGVASID QKIGLSQKIT AGTSLVTEKI KGVDQSFQVT ERTKSAFATA EQTVSSAGTA VMKNRFVLTG VSWAAGAFNR VAKAAGEVGQ KTKEKVEAEQ
401: PPQPSQSEQK PPEGYSPLH
001: MAVRSVKVGN LSSGATEHDI KEFFSFSGEV ESIDIQSNEH SAYVTFKETQ GAETAVLLSG ASIADQSVII ELAPNYSPPA APHAETQSSG AESVVQKAED
101: VVSSMLAKGF ILGKDAVGKA KAFDEKHGFT STATAGVASL DQKIGLSQKL TAGTSLVNEK IKAVDQNFQV TERTKSVYAA AEQTVSSAGS AVMKNRYVLT
201: GVSWAAGAFN RVAQAAGEVG QKTKEKVEAE QPSQPAQSQQ QLPEGYSPIH SSEYSKN
101: VVSSMLAKGF ILGKDAVGKA KAFDEKHGFT STATAGVASL DQKIGLSQKL TAGTSLVNEK IKAVDQNFQV TERTKSVYAA AEQTVSSAGS AVMKNRYVLT
201: GVSWAAGAFN RVAQAAGEVG QKTKEKVEAE QPSQPAQSQQ QLPEGYSPIH SSEYSKN
Arabidopsis Description
BPA1binding partner of acd11 1 [Source:TAIR;Acc:AT5G16840]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.