Factsheet for Bra008589.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69415	Canola	cytosol	98.47	99.23
Bra006373.1-P	Field mustard	cytosol	90.46	90.8
Bra023585.1-P	Field mustard	nucleus	85.11	88.14
AT5G16840.2	Thale cress	nucleus	85.11	85.77
PGSC0003DMT400008196	Potato	cytosol, mitochondrion, nucleus	62.6	58.99
Solyc03g097110.2.1	Tomato	nucleus	62.21	58.63
GSMUA_Achr9P23330_001	Banana	nucleus, peroxisome, plastid	54.58	58.61
Os06t0112400-01	Rice	plasma membrane	57.63	57.85
VIT_16s0039g01860.t01	Wine grape	cytosol, nucleus, plastid	60.31	57.04
HORVU7Hr1G003710.1	Barley	cytosol	56.87	56.65
EER89059	Sorghum	cytosol	58.02	56.51
TraesCS4A01G458600.1	Wheat	cytosol, nucleus, plastid	56.87	56.02
TraesCS7D01G027100.1	Wheat	plastid	56.87	56.02
GSMUA_AchrUn_...	Banana	cytosol, extracellular, nucleus	57.25	53.96
Zm00001d045559_P002	Maize	cytosol, endoplasmic reticulum, nucleus	56.11	52.88
KRH24024	Soybean	nucleus	53.44	47.95
TraesCS7A01G030900.2	Wheat	plastid	56.87	47.3
Bra040177.1-P	Field mustard	nucleus	53.82	46.69
Bra012646.1-P	Field mustard	nucleus	54.2	45.51
PGSC0003DMT400069547	Potato	nucleus	58.02	44.71
GSMUA_Achr5P14070_001	Banana	cytosol, nucleus, plastid	47.33	44.6
Zm00001d035920_P002	Maize	extracellular, vacuole	57.63	43.64
Bra012647.1-P	Field mustard	cytosol	34.35	43.27
Zm00001d026206_P001	Maize	cytosol, nucleus, plastid	51.15	42.68
GSMUA_Achr8P14700_001	Banana	plastid	49.62	42.62
EES12769	Sorghum	cytosol	50.38	42.04
Zm00001d002475_P001	Maize	extracellular	50.0	41.72
Os04t0594400-01	Rice	plasma membrane	50.0	41.72
Zm00001d054082_P001	Maize	cytosol	45.04	41.7
TraesCS2D01G444000.1	Wheat	extracellular	50.0	41.59
Solyc06g072770.2.1	Tomato	nucleus	57.63	41.48
TraesCS2A01G445100.1	Wheat	extracellular	50.0	41.32
Bra039914.1-P	Field mustard	cytosol	41.22	41.06
TraesCS2B01G466100.1	Wheat	extracellular	49.62	41.01
Bra024988.1-P	Field mustard	vacuole	51.53	40.54
Zm00001d026150_P001	Maize	cytosol	37.02	40.42
Zm00001d031612_P001	Maize	cytosol	37.02	40.42
Bra019660.1-P	Field mustard	cytosol	36.64	39.34
Bra016705.1-P	Field mustard	nucleus	35.11	37.7
Zm00001d046992_P001	Maize	cytosol	46.56	37.31
Os04t0624800-01	Rice	nucleus	50.0	34.84
OQU85574	Sorghum	nucleus	50.76	34.02
Zm00001d031493_P001	Maize	cytosol, mitochondrion, plastid	41.6	33.54
TraesCS6D01G249000.1	Wheat	nucleus, plastid	46.95	32.2
Bra001017.1-P	Field mustard	cytosol, nucleus, plastid	30.53	31.75
Zm00001d051524_P002	Maize	nucleus	48.47	31.51
TraesCS6A01G265600.1	Wheat	extracellular	47.71	31.49
TraesCS6B01G292900.1	Wheat	endoplasmic reticulum, extracellular	46.56	30.73
Zm00001d014267_P001	Maize	nucleus	48.09	29.86
Zm00001d046215_P001	Maize	cytosol	34.73	28.44

Protein Annotations

EnsemblPlants:Bra008589.1	EnsemblPlants:Bra008589.1-P	EnsemblPlantsGene:Bra008589	Gene3D:3.30.70.330	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	InterPro:IPR000504	InterPro:IPR012677	InterPro:Nucleotide-bd_a/b_plait_sf	InterPro:RBD_domain_sf
InterPro:RRM_dom	PANTHER:PTHR44136	PANTHER:PTHR44136:SF6	PFAM:PF00076	PFscan:PS50102	SEG:seg
SMART:SM00360	SUPFAM:SSF54928	UniParc:UPI00025446B5	UniProt:M4CWJ2	MapMan:35.1	:

Description

AT5G16840 (E=2e-111) BPA1 | BPA1 (BINDINGPARTNEROFACD11 1); nucleic acid binding / nucleotide binding / oxidoreductase

Coordinates

chrA10:-:12940963..12942188

Molecular Weight (calculated)

27406.0 Da

IEP (calculated)

5.967

GRAVY (calculated)

-0.311

Length

262 amino acids

Sequence
(BLAST)

001: MVIQIRSVKV GNLSSGATEH NIKEFFSFSG EVENIDIQGG EHSAYVTFKD PQGAETAVLL SGASIADQSV TIELAPNYTP PAAPHAETQS GGGGAAEGVV
101: QKAEDVVSSM LAKGFILGKD AVGKAKAFDE KLGFTSTATA GVASIDQKIG LSQKFTAGTT LVNDKIKEVD QSLHVSERTK SAYASAEQTV SSAGNAVMKN
201: RYVLTGVSWA AGAFSRVAKA AGEVSQKTKE KVEAEHPPQP SQSQEQLPEG YAPIHSSEYS KK

Best Arabidopsis Sequence Match ( AT5G16840.1 )
(BLAST)

001: MASQVRSVKV GNLSSGATEH DIKEFFSFSG EVESIDIQSN EHSAYVTFKE TQGAETAVLL SGASIADQSV IIELAPNYSP PAAPHAETQS SGAESVVQKA
101: EDVVSSMLAK GFILGKDAVG KAKAFDEKHG FTSTATAGVA SLDQKIGLSQ KLTAGTSLVN EKIKAVDQNF QVTERTKSVY AAAEQTVSSA GSAVMKNRYV
201: LTGVSWAAGA FNRVAQAAGE VGQKTKEKVE AEQPSQPAQS QQQLPEGYSP IHSSEYSKN

Arabidopsis Description

BPA1binding partner of acd11 1 [Source:TAIR;Acc:AT5G16840]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.