Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER87703 | Sorghum | cytosol | 91.79 | 91.79 |
| Os06t0107000-01 | Rice | cytosol, nucleus | 71.27 | 70.74 |
| TraesCS7A01G019000.1 | Wheat | cytosol | 70.52 | 64.29 |
| TraesCSU01G065800.1 | Wheat | cytosol | 69.03 | 62.5 |
| TraesCS7D01G016100.1 | Wheat | nucleus | 69.78 | 57.54 |
| GSMUA_AchrUn_... | Banana | cytosol | 51.87 | 56.05 |
| Bra013910.1-P | Field mustard | cytosol | 52.24 | 55.78 |
| CDX89402 | Canola | cytosol | 52.24 | 55.78 |
| CDX94426 | Canola | cytosol | 52.24 | 55.56 |
| HORVU7Hr1G002080.2 | Barley | cytosol | 40.67 | 55.33 |
| VIT_16s0050g01050.t01 | Wine grape | cytosol | 50.0 | 55.14 |
| Zm00001d029725_P001 | Maize | extracellular, mitochondrion | 50.0 | 54.69 |
| KRH08874 | Soybean | cytosol | 50.0 | 54.69 |
| KRH38387 | Soybean | cytosol | 50.0 | 54.03 |
| CDY66007 | Canola | cytosol | 51.12 | 53.94 |
| Bra010452.1-P | Field mustard | cytosol | 51.12 | 53.94 |
| CDX94429 | Canola | cytosol | 48.51 | 53.06 |
| CDX89404 | Canola | cytosol | 48.51 | 53.06 |
| Bra013908.1-P | Field mustard | cytosol | 48.51 | 53.06 |
| CDY49480 | Canola | cytosol | 50.0 | 52.96 |
| AT4G25680.1 | Thale cress | cytosol | 48.51 | 51.59 |
| AT4G25660.1 | Thale cress | cytosol | 48.88 | 51.37 |
| KRH35244 | Soybean | cytosol, peroxisome, plastid | 38.81 | 43.33 |
| PGSC0003DMT400018924 | Potato | cytosol | 33.96 | 42.92 |
| Solyc02g082060.1.1 | Tomato | cytosol | 33.58 | 42.25 |
| Zm00001d046249_P001 | Maize | cytosol | 20.15 | 25.59 |
| Zm00001d028130_P001 | Maize | mitochondrion | 23.13 | 24.8 |
| Zm00001d026190_P001 | Maize | cytosol | 18.66 | 24.04 |
| Zm00001d002758_P002 | Maize | cytosol | 18.28 | 23.45 |
| Zm00001d048173_P001 | Maize | mitochondrion | 22.01 | 23.32 |
| Zm00001d017468_P001 | Maize | cytosol | 16.79 | 21.53 |
| Zm00001d045118_P001 | Maize | plastid | 19.4 | 21.49 |
| Zm00001d048567_P002 | Maize | endoplasmic reticulum, plasma membrane | 20.15 | 20.77 |
| Zm00001d027266_P001 | Maize | mitochondrion, plastid | 20.15 | 18.18 |
Protein Annotations
| EnsemblPlants:Zm00001d045580_P001 | EnsemblPlants:Zm00001d045580_T001 | EnsemblPlantsGene:Zm00001d045580 | EntrezGene:103638177 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom |
| PANTHER:PTHR12378 | PANTHER:PTHR12378:SF18 | PFAM:PF05903 | ProteinID:AQL02655.1 | SEG:seg | SMART:SM01179 |
| UniParc:UPI000221BB39 | UniProt:K7VT63 | MapMan:19.4.1.7 | : | : | : |
Description
DeSI-like protein
Coordinates
chr9:-:27183411..27186157
Molecular Weight (calculated)
28991.7 Da
IEP (calculated)
6.387
GRAVY (calculated)
-0.458
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQDVVAHVY DVATAGSDTT VLHINRFFKD AIGLGGIFHT AIQVYGDEEW SFGYCERGTG VFSCPPCKNP MYTYRESIVL GKTNCCILKV NQILRELSWE
101: WPGHSYELLS RNCNHFCNTF CEKLEVSKLP GWVNRFANAG DAALEVAETT AGKLKQAKKE IVTACKAAST FLTGTSSSAS SNAEDTGGST STGNSLFEGA
201: WIRSIIGMTM KPSKSLVCVD SSDSDSSGSE SESDGDRPNS DDNAERQAKG VKQERGTKKK NNGPHCHS
101: WPGHSYELLS RNCNHFCNTF CEKLEVSKLP GWVNRFANAG DAALEVAETT AGKLKQAKKE IVTACKAAST FLTGTSSSAS SNAEDTGGST STGNSLFEGA
201: WIRSIIGMTM KPSKSLVCVD SSDSDSSGSE SESDGDRPNS DDNAERQAKG VKQERGTKKK NNGPHCHS
001: MTEVVLHIYD VTNSGSEKTN NTIVQINRFF KDGIGLGGIF HSAIQVYGND EWSYGYCELG TGVFSCPSGK NPMYTYREKI VLGKTDCTIF MVNQMLRELS
101: REWPGHTYDL LSKNCNHFCD VLCDRLGVPK IPGWVNRFAN AGDTALEVAG NTAMRMKQAK TELVSASKVA YRFLSNVTSN VTNGSNGSPQ RPGTLNNSDS
201: GNLRLQGSWL KGLLNTAKPS TSTEIGNKDE DANHAVTNQK KQSRDSDVLL FQ
101: REWPGHTYDL LSKNCNHFCD VLCDRLGVPK IPGWVNRFAN AGDTALEVAG NTAMRMKQAK TELVSASKVA YRFLSNVTSN VTNGSNGSPQ RPGTLNNSDS
201: GNLRLQGSWL KGLLNTAKPS TSTEIGNKDE DANHAVTNQK KQSRDSDVLL FQ
Arabidopsis Description
At4g25680 [Source:UniProtKB/TrEMBL;Acc:Q9SZZ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.