Factsheet for Zm00001d012165_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

mitochondrion 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04034	Sorghum	extracellular, plasma membrane	96.27	96.27
Zm00001d042527_P001	Maize	plasma membrane	94.41	93.83
Os01t0896400-01	Rice	extracellular, plasma membrane	88.2	85.54
TraesCS3A01G398800.1	Wheat	plasma membrane	87.58	84.43
TraesCS3D01G392800.1	Wheat	plasma membrane	88.2	84.02
TraesCS3B01G431100.1	Wheat	plasma membrane	88.2	84.02
HORVU3Hr1G089620.1	Barley	extracellular, plasma membrane	86.96	83.83
Zm00001d038647_P001	Maize	plasma membrane	73.29	70.66
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane, plastid	60.25	54.49
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	60.25	53.89
VIT_00s0499g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	53.42	45.5
CDX74612	Canola	extracellular, plasma membrane	50.93	44.81
CDY37661	Canola	extracellular, plasma membrane	50.93	44.81
Bra035348.1-P	Field mustard	extracellular, plasma membrane	50.31	44.26
Zm00001d025762_P001	Maize	plastid	52.17	43.98
AT5G16250.1	Thale cress	plasma membrane	49.69	43.72
Bra006345.1-P	Field mustard	plasma membrane	48.45	43.09
PGSC0003DMT400041718	Potato	plasma membrane	50.31	42.86
KRH40258	Soybean	plastid	49.69	42.55
CDX70681	Canola	plasma membrane	47.83	42.54
CDX78677	Canola	plasma membrane	47.83	42.54
PGSC0003DMT400060056	Potato	plasma membrane	45.34	42.44
KRH00966	Soybean	plasma membrane	49.69	42.11
AT3G02640.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	47.83	41.62
Bra008630.1-P	Field mustard	plasma membrane	47.2	41.53
Zm00001d003172_P001	Maize	plastid	49.69	41.45
CDY26511	Canola	plasma membrane	47.2	41.3
CDX69458	Canola	plasma membrane	47.2	41.3
PGSC0003DMT400059623	Potato	plasma membrane	45.34	40.33
Solyc08g014350.1.1	Tomato	plasma membrane	45.34	40.33
AT5G36800.2	Thale cress	plasma membrane	49.69	36.7
AT5G36710.2	Thale cress	plasma membrane	49.69	36.7
Solyc05g055680.2.1	Tomato	plasma membrane	34.78	36.36
CDY36665	Canola	endoplasmic reticulum, extracellular, plastid	22.98	35.92
Solyc11g008690.1.1	Tomato	plasma membrane	50.31	35.06
CDY15808	Canola	extracellular	14.29	27.06

Protein Annotations

EMBL:BT034914	EnsemblPlants:Zm00001d012165_P001	EnsemblPlants:Zm00001d012165_T001	EnsemblPlantsGene:Zm00001d012165	EntrezGene:100192825	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR34124	PANTHER:PTHR34124:SF3	PFscan:PS51257	ProteinID:AQK99017.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI00017B6802	UniProt:B4FCS6	MapMan:35.2	:

Description

No Description!

Coordinates

chr8:+:169363195..169363680

Molecular Weight (calculated)

17117.7 Da

IEP (calculated)

6.332

GRAVY (calculated)

0.500

Length

161 amino acids

Sequence
(BLAST)

001: MAGKSHTRKA FLLCNYVLMG AASSCIFLTL SLRLLPSPCG LLLLFLHALT AVFSAAGCSG SFTAPATPAQ WHNAHTAGAA LTAIFQGAVA LLAFTRTSDF
101: LAELQSYVRD EDGAVILKMV GGLGTAIFVL EWAALALAFS LRLDDDDDDD LQAKNRQPYH V

Best Arabidopsis Sequence Match ( AT5G36710.2 )
(BLAST)

001: MYAYKPQIKV NLSRNTKTNI KTPKKNQSSL LEFEKMGMSK SKGNTHNIFL LCNYILLGSA SSCIFLTISL RLFPSLSGLS LIFLYTLTIA TAVSGCSIFA
101: SSTSATASDR LYGSHMVATV LTAIFQGAVS VLIFTRTGDF LRFLKSYVRE EDGEVILKLS GGLCVLMFCL EWIVLVLAFL LKYSDYLDES VVDDDDFKVR
201: RQEEDLKDWP SYPFQLKI

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LDP3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.