Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400060056 | Potato | plasma membrane | 78.57 | 70.35 |
| KRH40258 | Soybean | plastid | 62.99 | 51.6 |
| KRH00966 | Soybean | plasma membrane | 62.99 | 51.05 |
| GSMUA_Achr2P20850_001 | Banana | plastid | 53.25 | 44.32 |
| Solyc11g008690.1.1 | Tomato | plasma membrane | 66.23 | 44.16 |
| GSMUA_Achr10P... | Banana | plastid | 52.6 | 43.55 |
| Solyc08g014350.1.1 | Tomato | plasma membrane | 50.0 | 42.54 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 47.4 | 41.01 |
| HORVU2Hr1G085690.1 | Barley | plastid | 50.65 | 40.62 |
| TraesCS2B01G371300.1 | Wheat | plastid | 50.65 | 40.62 |
| TraesCS2A01G353400.1 | Wheat | plastid | 50.65 | 40.62 |
| TraesCS2D01G350700.1 | Wheat | plastid | 50.65 | 40.62 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 47.4 | 40.56 |
| Os04t0496300-01 | Rice | plastid | 48.05 | 38.34 |
| Zm00001d003172_P001 | Maize | plastid | 48.05 | 38.34 |
| OQU81867 | Sorghum | plastid | 48.05 | 38.14 |
| Zm00001d025762_P001 | Maize | plastid | 46.1 | 37.17 |
| EES04034 | Sorghum | extracellular, plasma membrane | 37.01 | 35.4 |
| HORVU3Hr1G089620.1 | Barley | extracellular, plasma membrane | 38.31 | 35.33 |
| Os01t0896400-01 | Rice | extracellular, plasma membrane | 37.66 | 34.94 |
| TraesCS3B01G431100.1 | Wheat | plasma membrane | 38.31 | 34.91 |
| Zm00001d012165_P001 | Maize | extracellular, plasma membrane | 36.36 | 34.78 |
| Zm00001d038647_P001 | Maize | plasma membrane | 37.66 | 34.73 |
| TraesCS3A01G398800.1 | Wheat | plasma membrane | 37.66 | 34.73 |
| EES18467 | Sorghum | extracellular, plasma membrane | 37.01 | 34.55 |
| Os05t0507000-01 | Rice | extracellular, plasma membrane | 37.01 | 34.34 |
| TraesCS1D01G325700.1 | Wheat | plasma membrane | 37.66 | 34.32 |
| TraesCS3D01G392800.1 | Wheat | plasma membrane | 37.66 | 34.32 |
| Zm00001d042527_P001 | Maize | plasma membrane | 35.71 | 33.95 |
| TraesCS1B01G338000.1 | Wheat | plasma membrane | 37.01 | 33.73 |
| TraesCS1A01G325000.1 | Wheat | plasma membrane | 37.01 | 33.73 |
| Os05t0564601-00 | Rice | cytosol, nucleus, plastid | 15.58 | 13.64 |
Protein Annotations
| EnsemblPlants:Solyc05g055680.2.1 | EnsemblPlantsGene:Solyc05g055680.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR34124 |
| PANTHER:PTHR34124:SF2 | TMHMM:TMhelix | UniParc:UPI000276724E | UniProt:K4C2P3 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5:-:65226118..65226863
Molecular Weight (calculated)
17370.2 Da
IEP (calculated)
8.367
GRAVY (calculated)
0.299
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFNNYYSDS SEPHHHKTHK IFLFCNYILL GASSSCIFLT LSLRLIPSLY GFLFILLHIL TIGGAVFGCA TVSAQSADTR GYGAHMRRGC VMILRLAGGL
101: CALIFCLEWI SITLAFFLKY YDYIEGNNGN IAMKNRGKVQ DEQDVKNWPW PFQV
101: CALIFCLEWI SITLAFFLKY YDYIEGNNGN IAMKNRGKVQ DEQDVKNWPW PFQV
001: MGLIPQPQES IQESHYYTHK LFLTANYVLL GASSSCIFLT LSLRLIPSLC GFFLILLHAT TIAAAVSGCA AASYGKNRWY AAHMIATVLT AIFQGSVSVL
101: IFTNTSNFLE SLNSYVREKE ASMILKLAGG LCVVIFCLEW IVLVLAFFLK YYAYVDGDNN GVAMKRTGKV QSEETLKNSP WAFQV
101: IFTNTSNFLE SLNSYVREKE ASMILKLAGG LCVVIFCLEW IVLVLAFFLK YYAYVDGDNN GVAMKRTGKV QSEETLKNSP WAFQV
Arabidopsis Description
F16B3.27 protein [Source:UniProtKB/TrEMBL;Acc:Q9M878]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.