Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G089620.1 | Barley | extracellular, plasma membrane | 97.6 | 97.6 |
| TraesCS3D01G392800.1 | Wheat | plasma membrane | 97.01 | 95.86 |
| TraesCS3B01G431100.1 | Wheat | plasma membrane | 96.41 | 95.27 |
| EES04034 | Sorghum | extracellular, plasma membrane | 85.03 | 88.2 |
| Zm00001d042527_P001 | Maize | plasma membrane | 85.03 | 87.65 |
| Zm00001d012165_P001 | Maize | extracellular, plasma membrane | 84.43 | 87.58 |
| Os01t0896400-01 | Rice | extracellular, plasma membrane | 84.43 | 84.94 |
| TraesCS1A01G325000.1 | Wheat | plasma membrane | 74.85 | 73.96 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 61.08 | 56.67 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 58.68 | 55.06 |
| Bra006345.1-P | Field mustard | plasma membrane | 50.3 | 46.41 |
| CDX78677 | Canola | plasma membrane | 49.7 | 45.86 |
| CDX70681 | Canola | plasma membrane | 49.7 | 45.86 |
| VIT_00s0499g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 51.5 | 45.5 |
| CDY37661 | Canola | extracellular, plasma membrane | 49.1 | 44.81 |
| AT5G16250.1 | Thale cress | plasma membrane | 48.5 | 44.26 |
| CDX74612 | Canola | extracellular, plasma membrane | 48.5 | 44.26 |
| Bra035348.1-P | Field mustard | extracellular, plasma membrane | 48.5 | 44.26 |
| KRH40258 | Soybean | plastid | 49.7 | 44.15 |
| TraesCS2A01G353400.1 | Wheat | plastid | 50.3 | 43.75 |
| Bra008630.1-P | Field mustard | plasma membrane | 47.9 | 43.72 |
| KRH00966 | Soybean | plasma membrane | 49.7 | 43.68 |
| PGSC0003DMT400060056 | Potato | plasma membrane | 44.91 | 43.6 |
| CDY26511 | Canola | plasma membrane | 47.9 | 43.48 |
| CDX69458 | Canola | plasma membrane | 47.9 | 43.48 |
| PGSC0003DMT400041718 | Potato | plasma membrane | 49.1 | 43.39 |
| AT3G02640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 47.31 | 42.7 |
| Solyc08g014350.1.1 | Tomato | plasma membrane | 46.11 | 42.54 |
| PGSC0003DMT400059623 | Potato | plasma membrane | 44.91 | 41.44 |
| CDY36665 | Canola | endoplasmic reticulum, extracellular, plastid | 23.35 | 37.86 |
| Solyc05g055680.2.1 | Tomato | plasma membrane | 34.73 | 37.66 |
| AT5G36800.2 | Thale cress | plasma membrane | 48.5 | 37.16 |
| AT5G36710.2 | Thale cress | plasma membrane | 48.5 | 37.16 |
| Solyc11g008690.1.1 | Tomato | plasma membrane | 49.1 | 35.5 |
| CDY15808 | Canola | extracellular | 14.97 | 29.41 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G398800.1 | EnsemblPlantsGene:TraesCS3A01G398800 | PANTHER:PTHR34124 | PANTHER:PTHR34124:SF3 | PFscan:PS51257 | SEG:seg |
| TMHMM:TMhelix | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:645634540..645635043
Molecular Weight (calculated)
17552.1 Da
IEP (calculated)
5.882
GRAVY (calculated)
0.538
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGKVHTHK AFLLCNYALL GAASSCIFLT LSLRLVPSPC GLLLVFLHAL TAVFSAAGCS GSFTAGPANP APWHTAHTAG AALTAIFQGA VALLAFTRTA
101: DFLAELQSYV RDDDGAVILK MVGGLGTAIF VLEWAALALA FSLRLDEDDD GDDDLRRAKN WADAYHV
101: DFLAELQSYV RDDDGAVILK MVGGLGTAIF VLEWAALALA FSLRLDEDDD GDDDLRRAKN WADAYHV
001: MGMSKSKGNT HNIFLLCNYI LLGSASSCIF LTISLRLFPS LSGLSLIFLY TLTIATAVSG CSIFASSTSA TASDRLYGSH MVATVLTAIF QGAVSVLIFT
101: RTGDFLRFLK SYVREEDGEV ILKLSGGLCV LMFCLEWIVL VLAFLLKYSD YLDESVVDDD DFKVRRQEED LKDWPSYPFQ LKI
101: RTGDFLRFLK SYVREEDGEV ILKLSGGLCV LMFCLEWIVL VLAFLLKYSD YLDESVVDDD DFKVRRQEED LKDWPSYPFQ LKI
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LDP3]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.