Skip to main content
crop-pal logo
Tomato
Search for another protein from :
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • plasma membrane 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400041718 Potato plasma membrane 80.09 97.88
KRH40258 Soybean plastid 55.41 68.09
KRH00966 Soybean plasma membrane 54.55 66.32
Solyc05g055680.2.1 Tomato plasma membrane 44.16 66.23
GSMUA_Achr2P20850_001 Banana plastid 48.92 61.08
GSMUA_Achr10P... Banana plastid 48.92 60.75
Solyc08g014350.1.1 Tomato plasma membrane 43.29 55.25
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane, plastid 41.13 53.37
GSMUA_Achr11P... Banana endoplasmic reticulum, plasma membrane 40.69 52.22
EES04034 Sorghum extracellular, plasma membrane 35.93 51.55
HORVU2Hr1G085690.1 Barley plastid 42.42 51.04
TraesCS2D01G350700.1 Wheat plastid 42.42 51.04
TraesCS2B01G371300.1 Wheat plastid 42.42 51.04
TraesCS2A01G353400.1 Wheat plastid 42.42 51.04
Os04t0496300-01 Rice plastid 42.42 50.78
Zm00001d012165_P001 Maize extracellular, plasma membrane 35.06 50.31
EES18467 Sorghum extracellular, plasma membrane 35.5 49.7
Os05t0507000-01 Rice extracellular, plasma membrane 35.5 49.4
Zm00001d042527_P001 Maize plasma membrane 34.63 49.38
Zm00001d003172_P001 Maize plastid 41.13 49.22
TraesCS1D01G325700.1 Wheat plasma membrane 35.93 49.11
TraesCS3B01G431100.1 Wheat plasma membrane 35.93 49.11
TraesCS3A01G398800.1 Wheat plasma membrane 35.5 49.1
HORVU3Hr1G089620.1 Barley extracellular, plasma membrane 35.5 49.1
Zm00001d038647_P001 Maize plasma membrane 35.5 49.1
OQU81867 Sorghum plastid 41.13 48.97
TraesCS1A01G325000.1 Wheat plasma membrane 35.5 48.52
TraesCS1B01G338000.1 Wheat plasma membrane 35.5 48.52
TraesCS3D01G392800.1 Wheat plasma membrane 35.5 48.52
Zm00001d025762_P001 Maize plastid 39.83 48.17
Os01t0896400-01 Rice extracellular, plasma membrane 33.77 46.99
Os05t0564601-00 Rice cytosol, nucleus, plastid 23.38 30.68
Protein Annotations
EnsemblPlants:Solyc11g008690.1.1EnsemblPlantsGene:Solyc11g008690.1GO:GO:0005575GO:GO:0016020GO:GO:0016021PANTHER:PTHR34124
PANTHER:PTHR34124:SF2TMHMM:TMhelixUniParc:UPI000276AA57UniProt:K4D5C9MapMan:35.2:
Description
No Description!
Coordinates
chr11:-:2874856..2875551
Molecular Weight (calculated)
26040.0 Da
IEP (calculated)
9.140
GRAVY (calculated)
0.332
Length
231 amino acids
Sequence
(BLAST)
001: MTVAPHPLPQ LLHLYNQNSY SVLHFTNKKL KNFSEKSHQF KKMGFTSYAE ISESLHRTRK FFLLCNYILL GAASSCIFLT LSLRLIPSLS GFFLIFLHII
101: TIGGAVFGCS AVSTRSSMGN WYGPHMVFTV LTAILQGSVF VLIFTRTGDF LGKLKSYVRE EDGEMILRLA GGLCALIFCL EWVVLTFAFF LKYYAYVEGD
201: GNVVGGSIGM KRSAKVQDEE DIKNWPWPFQ V
Best Arabidopsis Sequence Match ( AT5G16250.1 )
(BLAST)
001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.