Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81867 | Sorghum | plastid | 95.29 | 93.81 |
| Zm00001d003172_P001 | Maize | plastid | 94.76 | 93.78 |
| TraesCS2D01G350700.1 | Wheat | plastid | 92.15 | 91.67 |
| TraesCS2B01G371300.1 | Wheat | plastid | 92.15 | 91.67 |
| TraesCS2A01G353400.1 | Wheat | plastid | 91.62 | 91.15 |
| HORVU2Hr1G085690.1 | Barley | plastid | 91.1 | 90.62 |
| Os04t0496300-01 | Rice | plastid | 90.05 | 89.12 |
| GSMUA_Achr10P... | Banana | plastid | 60.73 | 62.37 |
| GSMUA_Achr2P20850_001 | Banana | plastid | 57.59 | 59.46 |
| AT5G16250.1 | Thale cress | plasma membrane | 50.26 | 52.46 |
| Zm00001d012165_P001 | Maize | extracellular, plasma membrane | 43.98 | 52.17 |
| Bra006345.1-P | Field mustard | plasma membrane | 49.21 | 51.93 |
| Bra008630.1-P | Field mustard | plasma membrane | 49.74 | 51.91 |
| Zm00001d042527_P001 | Maize | plasma membrane | 43.98 | 51.85 |
| VIT_00s0499g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 51.31 | 51.85 |
| CDX69458 | Canola | plasma membrane | 49.74 | 51.63 |
| Zm00001d038647_P001 | Maize | plasma membrane | 45.03 | 51.5 |
| CDX70681 | Canola | plasma membrane | 48.69 | 51.38 |
| CDY26511 | Canola | plasma membrane | 49.21 | 51.09 |
| CDX78677 | Canola | plasma membrane | 48.17 | 50.83 |
| CDY36665 | Canola | endoplasmic reticulum, extracellular, plastid | 27.23 | 50.49 |
| KRH40258 | Soybean | plastid | 49.21 | 50.0 |
| PGSC0003DMT400041718 | Potato | plasma membrane | 49.21 | 49.74 |
| KRH00966 | Soybean | plasma membrane | 49.21 | 49.47 |
| AT3G02640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 47.64 | 49.19 |
| PGSC0003DMT400060056 | Potato | plasma membrane | 43.98 | 48.84 |
| CDX74612 | Canola | extracellular, plasma membrane | 45.03 | 46.99 |
| Bra035348.1-P | Field mustard | extracellular, plasma membrane | 44.5 | 46.45 |
| Solyc05g055680.2.1 | Tomato | plasma membrane | 37.17 | 46.1 |
| CDY37661 | Canola | extracellular, plasma membrane | 43.98 | 45.9 |
| PGSC0003DMT400059623 | Potato | plasma membrane | 41.88 | 44.2 |
| Solyc08g014350.1.1 | Tomato | plasma membrane | 41.36 | 43.65 |
| CDY15808 | Canola | extracellular | 17.8 | 40.0 |
| Solyc11g008690.1.1 | Tomato | plasma membrane | 48.17 | 39.83 |
| AT5G36800.2 | Thale cress | plasma membrane | 43.46 | 38.07 |
| AT5G36710.2 | Thale cress | plasma membrane | 43.46 | 38.07 |
Protein Annotations
| EnsemblPlants:Zm00001d025762_P001 | EnsemblPlants:Zm00001d025762_T001 | EnsemblPlantsGene:Zm00001d025762 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR34124 | PANTHER:PTHR34124:SF2 | ProteinID:AQK44514.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000221BE13 |
| UniProt:K7U4U9 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:128649921..128650496
Molecular Weight (calculated)
20040.5 Da
IEP (calculated)
8.825
GRAVY (calculated)
0.526
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGLSVIAPP ARDTASPQHR RARRAFLVSN YLILGCASGC GFLTLSLRLV PSVDGFLLIL LHALTVAAAV AGCAVIAAPD PPRGRCYTAH MSATAVVSIL
101: QGAAAVLAFS RTSEFLAGGL RSYVREEDGA VILRMVGGLG VAIFCLEWVA LALAFVLRYY AYVDRECGGN PQRRSAKVGG EDGAGTWPFQ V
101: QGAAAVLAFS RTSEFLAGGL RSYVREEDGA VILRMVGGLG VAIFCLEWVA LALAFVLRYY AYVDRECGGN PQRRSAKVGG EDGAGTWPFQ V
001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.