Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40258 | Soybean | plastid | 75.66 | 76.06 |
| AT5G16250.1 | Thale cress | plasma membrane | 73.55 | 75.96 |
| Bra008630.1-P | Field mustard | plasma membrane | 73.02 | 75.41 |
| CDX69458 | Canola | plasma membrane | 73.02 | 75.0 |
| CDX70681 | Canola | plasma membrane | 71.43 | 74.59 |
| CDY26511 | Canola | plasma membrane | 72.49 | 74.46 |
| CDX78677 | Canola | plasma membrane | 70.9 | 74.03 |
| KRH00966 | Soybean | plasma membrane | 74.07 | 73.68 |
| Bra006345.1-P | Field mustard | plasma membrane | 69.84 | 72.93 |
| AT3G02640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 68.78 | 70.27 |
| CDY36665 | Canola | endoplasmic reticulum, extracellular, plastid | 37.04 | 67.96 |
| GSMUA_Achr2P20850_001 | Banana | plastid | 64.55 | 65.95 |
| CDY15808 | Canola | extracellular | 29.1 | 64.71 |
| GSMUA_Achr10P... | Banana | plastid | 59.79 | 60.75 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 56.61 | 60.11 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 57.14 | 60.0 |
| HORVU2Hr1G085690.1 | Barley | plastid | 56.08 | 55.21 |
| TraesCS2D01G350700.1 | Wheat | plastid | 55.56 | 54.69 |
| TraesCS2B01G371300.1 | Wheat | plastid | 55.56 | 54.69 |
| EES04034 | Sorghum | extracellular, plasma membrane | 46.56 | 54.66 |
| TraesCS2A01G353400.1 | Wheat | plastid | 54.5 | 53.65 |
| Zm00001d012165_P001 | Maize | extracellular, plasma membrane | 45.5 | 53.42 |
| Os04t0496300-01 | Rice | plastid | 54.5 | 53.37 |
| Zm00001d003172_P001 | Maize | plastid | 53.97 | 52.85 |
| EES18467 | Sorghum | extracellular, plasma membrane | 46.03 | 52.73 |
| Zm00001d042527_P001 | Maize | plasma membrane | 44.97 | 52.47 |
| Zm00001d038647_P001 | Maize | plasma membrane | 46.03 | 52.1 |
| HORVU3Hr1G089620.1 | Barley | extracellular, plasma membrane | 46.03 | 52.1 |
| TraesCS3B01G431100.1 | Wheat | plasma membrane | 46.56 | 52.07 |
| OQU81867 | Sorghum | plastid | 53.44 | 52.06 |
| TraesCS3A01G398800.1 | Wheat | plasma membrane | 45.5 | 51.5 |
| TraesCS3D01G392800.1 | Wheat | plasma membrane | 46.03 | 51.48 |
| Zm00001d025762_P001 | Maize | plastid | 51.85 | 51.31 |
| Os01t0896400-01 | Rice | extracellular, plasma membrane | 44.97 | 51.2 |
| Os05t0507000-01 | Rice | extracellular, plasma membrane | 44.44 | 50.6 |
| TraesCS1D01G325700.1 | Wheat | plasma membrane | 44.44 | 49.7 |
| TraesCS1B01G338000.1 | Wheat | plasma membrane | 43.39 | 48.52 |
| TraesCS1A01G325000.1 | Wheat | plasma membrane | 42.86 | 47.93 |
| Os05t0564601-00 | Rice | cytosol, nucleus, plastid | 28.57 | 30.68 |
Protein Annotations
| EntrezGene:100267455 | wikigene:100267455 | MapMan:35.2 | ProteinID:CBI18793 | ProteinID:CBI18793.3 | UniProt:D7ST03 |
| EMBL:FN595016 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100267455 | wikigene:LOC100267455 |
| PANTHER:PTHR34124 | PANTHER:PTHR34124:SF9 | TIGR:TC52970 | TMHMM:TMhelix | UniParc:UPI0001985CDE | ArrayExpress:VIT_00s0499g00020 |
| EnsemblPlantsGene:VIT_00s0499g00020 | EnsemblPlants:VIT_00s0499g00020.t01 | unigene:Vvi.15333 | RefSeq:XP_002265070 | RefSeq:XP_002265070.1 | SEG:seg |
Description
No Description!
Coordinates
chrUn:+:30687608..30688431
Molecular Weight (calculated)
20681.2 Da
IEP (calculated)
7.081
GRAVY (calculated)
0.572
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLSIHNQSS SVTESHYHTH KVFLFCNYIL LGAASSCIFL TLSLRLLPSV CGFFLILLHI LTITGAVSGC AAASTGTSRW YAAHMVTTVL TAIFQGSVSV
101: LIFTRTSDFL GDLKSYVREE DGAVILKLAG GLSILIFCLE WVVMILAFFL KYYAYVEGDG CGSSGSAMKK SAKVQQEEDL KDWPWPFQV
101: LIFTRTSDFL GDLKSYVREE DGAVILKLAG GLSILIFCLE WVVMILAFFL KYYAYVEGDG CGSSGSAMKK SAKVQQEEDL KDWPWPFQV
001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.