Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- plasma membrane 3
- endoplasmic reticulum 2
- golgi 2
- extracellular 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025762_P001 | Maize | plastid | 93.81 | 95.29 |
| TraesCS2D01G350700.1 | Wheat | plastid | 92.27 | 93.23 |
| TraesCS2B01G371300.1 | Wheat | plastid | 92.27 | 93.23 |
| TraesCS2A01G353400.1 | Wheat | plastid | 91.24 | 92.19 |
| HORVU2Hr1G085690.1 | Barley | plastid | 90.72 | 91.67 |
| Os04t0496300-01 | Rice | plastid | 90.21 | 90.67 |
| GSMUA_Achr10P... | Banana | plastid | 58.76 | 61.29 |
| GSMUA_Achr2P20850_001 | Banana | plastid | 56.7 | 59.46 |
| Bra008630.1-P | Field mustard | plasma membrane | 51.03 | 54.1 |
| CDX69458 | Canola | plasma membrane | 51.03 | 53.8 |
| CDX70681 | Canola | plasma membrane | 50.0 | 53.59 |
| VIT_00s0499g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 52.06 | 53.44 |
| CDY26511 | Canola | plasma membrane | 50.52 | 53.26 |
| CDX78677 | Canola | plasma membrane | 49.48 | 53.04 |
| Bra006345.1-P | Field mustard | plasma membrane | 49.48 | 53.04 |
| AT5G16250.1 | Thale cress | plasma membrane | 50.0 | 53.01 |
| EES18467 | Sorghum | extracellular, plasma membrane | 44.85 | 52.73 |
| CDY36665 | Canola | endoplasmic reticulum, extracellular, plastid | 27.84 | 52.43 |
| KRH40258 | Soybean | plastid | 50.0 | 51.6 |
| PGSC0003DMT400041718 | Potato | plasma membrane | 50.0 | 51.32 |
| KRH00966 | Soybean | plasma membrane | 50.0 | 51.05 |
| EES04034 | Sorghum | extracellular, plasma membrane | 41.75 | 50.31 |
| AT3G02640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 47.94 | 50.27 |
| PGSC0003DMT400060056 | Potato | plasma membrane | 43.81 | 49.42 |
| Solyc05g055680.2.1 | Tomato | plasma membrane | 38.14 | 48.05 |
| CDX74612 | Canola | extracellular, plasma membrane | 44.85 | 47.54 |
| Bra035348.1-P | Field mustard | extracellular, plasma membrane | 44.33 | 46.99 |
| CDY37661 | Canola | extracellular, plasma membrane | 43.81 | 46.45 |
| PGSC0003DMT400059623 | Potato | plasma membrane | 41.75 | 44.75 |
| Solyc08g014350.1.1 | Tomato | plasma membrane | 41.75 | 44.75 |
| CDY15808 | Canola | extracellular | 19.59 | 44.71 |
| Solyc11g008690.1.1 | Tomato | plasma membrane | 48.97 | 41.13 |
| AT5G36800.2 | Thale cress | plasma membrane | 43.81 | 38.99 |
| AT5G36710.2 | Thale cress | plasma membrane | 43.81 | 38.99 |
Protein Annotations
| EnsemblPlants:OQU81867 | EnsemblPlantsGene:SORBI_3006G134200 | EntrezGene:8060199 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR34124 | PANTHER:PTHR34124:SF2 | ProteinID:OQU81867 | ProteinID:OQU81867.1 | RefSeq:XP_002448113.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0001A87655 | UniProt:A0A1Z5RDT8 | MapMan:35.2 | : | : |
Description
hypothetical protein
Coordinates
chr6:-:49767491..49768425
Molecular Weight (calculated)
20514.2 Da
IEP (calculated)
8.596
GRAVY (calculated)
0.552
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGLSVIAPP ARDSASPQHR RARRAFLVSN YLILGCASGC GFLTLSLRLV PSVDGFLLIL LHALTVAAAV AGCAVIAAPD PPRGRCYTVH MSATVVVSIL
101: QGAAAVLAFS RTAEFLSDGL KSYVREEDGA VILRMVGGLG VAIFCLEWVA LALAFVLRYY VYVDRECGGN PMRRSAKVGG EDGSAGTWPW PFQV
101: QGAAAVLAFS RTAEFLSDGL KSYVREEDGA VILRMVGGLG VAIFCLEWVA LALAFVLRYY VYVDRECGGN PMRRSAKVGG EDGSAGTWPW PFQV
001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.