Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006345.1-P | Field mustard | plasma membrane | 76.22 | 77.9 |
| CDX78677 | Canola | plasma membrane | 76.22 | 77.9 |
| AT5G16250.1 | Thale cress | plasma membrane | 76.76 | 77.6 |
| Bra008630.1-P | Field mustard | plasma membrane | 76.76 | 77.6 |
| CDX70681 | Canola | plasma membrane | 75.68 | 77.35 |
| CDX69458 | Canola | plasma membrane | 76.22 | 76.63 |
| CDY26511 | Canola | plasma membrane | 76.22 | 76.63 |
| VIT_00s0499g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 70.27 | 68.78 |
| CDY36665 | Canola | endoplasmic reticulum, extracellular, plastid | 37.3 | 66.99 |
| GSMUA_Achr2P20850_001 | Banana | plastid | 59.46 | 59.46 |
| CDY15808 | Canola | extracellular | 27.03 | 58.82 |
| GSMUA_Achr10P... | Banana | plastid | 57.84 | 57.53 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 51.89 | 53.33 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 50.81 | 52.81 |
| TraesCS2A01G353400.1 | Wheat | plastid | 52.43 | 50.52 |
| TraesCS2D01G350700.1 | Wheat | plastid | 52.43 | 50.52 |
| TraesCS2B01G371300.1 | Wheat | plastid | 52.43 | 50.52 |
| HORVU2Hr1G085690.1 | Barley | plastid | 52.43 | 50.52 |
| Os04t0496300-01 | Rice | plastid | 51.35 | 49.22 |
| Zm00001d003172_P001 | Maize | plastid | 50.81 | 48.7 |
| EES18467 | Sorghum | extracellular, plasma membrane | 43.24 | 48.48 |
| Zm00001d042527_P001 | Maize | plasma membrane | 42.16 | 48.15 |
| OQU81867 | Sorghum | plastid | 50.27 | 47.94 |
| Zm00001d038647_P001 | Maize | plasma membrane | 43.24 | 47.9 |
| EES04034 | Sorghum | extracellular, plasma membrane | 41.62 | 47.83 |
| Zm00001d012165_P001 | Maize | extracellular, plasma membrane | 41.62 | 47.83 |
| Zm00001d025762_P001 | Maize | plastid | 49.19 | 47.64 |
| HORVU3Hr1G089620.1 | Barley | extracellular, plasma membrane | 42.7 | 47.31 |
| TraesCS3A01G398800.1 | Wheat | plasma membrane | 42.7 | 47.31 |
| TraesCS3B01G431100.1 | Wheat | plasma membrane | 42.7 | 46.75 |
| Os01t0896400-01 | Rice | extracellular, plasma membrane | 41.62 | 46.39 |
| TraesCS3D01G392800.1 | Wheat | plasma membrane | 42.16 | 46.15 |
| AT5G36800.2 | Thale cress | plasma membrane | 53.51 | 45.41 |
| AT5G36710.2 | Thale cress | plasma membrane | 53.51 | 45.41 |
| TraesCS1D01G325700.1 | Wheat | plasma membrane | 41.08 | 44.97 |
| Os05t0507000-01 | Rice | extracellular, plasma membrane | 40.0 | 44.58 |
| TraesCS1B01G338000.1 | Wheat | plasma membrane | 40.54 | 44.38 |
| TraesCS1A01G325000.1 | Wheat | plasma membrane | 40.0 | 43.79 |
| Os05t0564601-00 | Rice | cytosol, nucleus, plastid | 27.03 | 28.41 |
Protein Annotations
| MapMan:35.2 | EntrezGene:821289 | UniProt:A0A178VN69 | ProteinID:AAF32471.1 | ProteinID:AEE73842.1 | ArrayExpress:AT3G02640 |
| EnsemblPlantsGene:AT3G02640 | RefSeq:AT3G02640 | TAIR:AT3G02640 | RefSeq:AT3G02640-TAIR-G | EnsemblPlants:AT3G02640.1 | TAIR:AT3G02640.1 |
| EMBL:AY062624 | EMBL:AY088259 | EMBL:AY128811 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | RefSeq:NP_566178.1 | ProteinID:OAP06645.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PANTHER:PTHR34124 | PANTHER:PTHR34124:SF2 | UniProt:Q9M878 | TMHMM:TMhelix | UniParc:UPI000009FE0B |
| SEG:seg | : | : | : | : | : |
Description
F16B3.27 protein [Source:UniProtKB/TrEMBL;Acc:Q9M878]
Coordinates
chr3:-:564884..565801
Molecular Weight (calculated)
20383.0 Da
IEP (calculated)
8.198
GRAVY (calculated)
0.543
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLIPQPQES IQESHYYTHK LFLTANYVLL GASSSCIFLT LSLRLIPSLC GFFLILLHAT TIAAAVSGCA AASYGKNRWY AAHMIATVLT AIFQGSVSVL
101: IFTNTSNFLE SLNSYVREKE ASMILKLAGG LCVVIFCLEW IVLVLAFFLK YYAYVDGDNN GVAMKRTGKV QSEETLKNSP WAFQV
101: IFTNTSNFLE SLNSYVREKE ASMILKLAGG LCVVIFCLEW IVLVLAFFLK YYAYVDGDNN GVAMKRTGKV QSEETLKNSP WAFQV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.