Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, plastid
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15808 | Canola | extracellular | 65.05 | 78.82 |
| CDX69458 | Canola | plasma membrane | 87.38 | 48.91 |
| CDY26511 | Canola | plasma membrane | 87.38 | 48.91 |
| Bra008630.1-P | Field mustard | plasma membrane | 84.47 | 47.54 |
| AT5G16250.1 | Thale cress | plasma membrane | 76.7 | 43.17 |
| CDX70681 | Canola | plasma membrane | 73.79 | 41.99 |
| CDX78677 | Canola | plasma membrane | 72.82 | 41.44 |
| AT3G02640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 66.99 | 37.3 |
| VIT_00s0499g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 67.96 | 37.04 |
| CDX74612 | Canola | extracellular, plasma membrane | 59.22 | 33.33 |
| CDY37661 | Canola | extracellular, plasma membrane | 55.34 | 31.15 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 54.37 | 31.11 |
| GSMUA_Achr2P20850_001 | Banana | plastid | 54.37 | 30.27 |
| GSMUA_Achr10P... | Banana | plastid | 51.46 | 28.49 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 48.54 | 28.09 |
| OQU81867 | Sorghum | plastid | 52.43 | 27.84 |
| TraesCS2D01G350700.1 | Wheat | plastid | 51.46 | 27.6 |
| TraesCS2B01G371300.1 | Wheat | plastid | 51.46 | 27.6 |
| Zm00001d003172_P001 | Maize | plastid | 51.46 | 27.46 |
| Zm00001d025762_P001 | Maize | plastid | 50.49 | 27.23 |
| TraesCS2A01G353400.1 | Wheat | plastid | 50.49 | 27.08 |
| Os04t0496300-01 | Rice | plastid | 50.49 | 26.94 |
| HORVU2Hr1G085690.1 | Barley | plastid | 49.51 | 26.56 |
| TraesCS3D01G392800.1 | Wheat | plasma membrane | 39.81 | 24.26 |
| EES18467 | Sorghum | extracellular, plasma membrane | 38.84 | 24.24 |
| Zm00001d038647_P001 | Maize | plasma membrane | 38.84 | 23.95 |
| TraesCS1D01G325700.1 | Wheat | plasma membrane | 38.84 | 23.67 |
| TraesCS3B01G431100.1 | Wheat | plasma membrane | 38.84 | 23.67 |
| EES04034 | Sorghum | extracellular, plasma membrane | 36.89 | 23.6 |
| Os01t0896400-01 | Rice | extracellular, plasma membrane | 37.86 | 23.49 |
| TraesCS3A01G398800.1 | Wheat | plasma membrane | 37.86 | 23.35 |
| HORVU3Hr1G089620.1 | Barley | extracellular, plasma membrane | 37.86 | 23.35 |
| TraesCS1A01G325000.1 | Wheat | plasma membrane | 37.86 | 23.08 |
| Zm00001d012165_P001 | Maize | extracellular, plasma membrane | 35.92 | 22.98 |
| Os05t0507000-01 | Rice | extracellular, plasma membrane | 36.89 | 22.89 |
| Zm00001d042527_P001 | Maize | plasma membrane | 35.92 | 22.84 |
| TraesCS1B01G338000.1 | Wheat | plasma membrane | 36.89 | 22.49 |
| Os05t0564601-00 | Rice | cytosol, nucleus, plastid | 36.89 | 21.59 |
Protein Annotations
| EnsemblPlants:CDY36665 | EnsemblPlantsGene:GSBRNA2T00062424001 | GO:A0A078HE85 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR34124 | PANTHER:PTHR34124:SF2 | ProteinID:CDY36665 | ProteinID:CDY36665.1 | TMHMM:TMhelix | UniParc:UPI0004EECD6F |
| UniProt:A0A078HE85 | MapMan:35.2 | : | : | : | : |
Description
BnaCnng07670DBnaCnng07670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HE85]
Coordinates
chrLK032381:-:58278..59544
Molecular Weight (calculated)
11681.3 Da
IEP (calculated)
8.707
GRAVY (calculated)
0.474
Length
103 amino acids
Sequence
(BLAST)
(BLAST)
001: MVATMITTIF QGSVSVLIFT NTANFLRSLK SYVREEDTAV ILKLGGGLCV VIFCFDWVVL VLAFFLKYYA YVERGGDRSV AVKRSGKVQS DENPKDWLWL
101: FQV
101: FQV
001: MGLIPQPQES IQESHYYTHK LFLTANYVLL GASSSCIFLT LSLRLIPSLC GFFLILLHAT TIAAAVSGCA AASYGKNRWY AAHMIATVLT AIFQGSVSVL
101: IFTNTSNFLE SLNSYVREKE ASMILKLAGG LCVVIFCLEW IVLVLAFFLK YYAYVDGDNN GVAMKRTGKV QSEETLKNSP WAFQV
101: IFTNTSNFLE SLNSYVREKE ASMILKLAGG LCVVIFCLEW IVLVLAFFLK YYAYVDGDNN GVAMKRTGKV QSEETLKNSP WAFQV
Arabidopsis Description
F16B3.27 protein [Source:UniProtKB/TrEMBL;Acc:Q9M878]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.