Factsheet for GSMUA_Achr11P11190_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

plastid 4
endoplasmic reticulum 4
nucleus 1
extracellular 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	80.9	80.0
EES18467	Sorghum	extracellular, plasma membrane	57.3	61.82
EES04034	Sorghum	extracellular, plasma membrane	55.06	60.87
Os05t0507000-01	Rice	extracellular, plasma membrane	56.74	60.84
Zm00001d038647_P001	Maize	plasma membrane	56.74	60.48
Zm00001d012165_P001	Maize	extracellular, plasma membrane	54.49	60.25
HORVU3Hr1G089620.1	Barley	extracellular, plasma membrane	56.18	59.88
Zm00001d042527_P001	Maize	plasma membrane	54.49	59.88
TraesCS3B01G431100.1	Wheat	plasma membrane	56.18	59.17
Os01t0896400-01	Rice	extracellular, plasma membrane	55.06	59.04
GSMUA_Achr2P20850_001	Banana	plastid	61.24	58.92
TraesCS3A01G398800.1	Wheat	plasma membrane	55.06	58.68
TraesCS3D01G392800.1	Wheat	plasma membrane	55.62	58.58
VIT_00s0499g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	60.11	56.61
TraesCS1D01G325700.1	Wheat	plasma membrane	53.37	56.21
Bra008630.1-P	Field mustard	plasma membrane	57.3	55.74
CDY26511	Canola	plasma membrane	57.3	55.43
CDX69458	Canola	plasma membrane	57.3	55.43
CDX78677	Canola	plasma membrane	56.18	55.25
CDX70681	Canola	plasma membrane	56.18	55.25
Bra006345.1-P	Field mustard	plasma membrane	56.18	55.25
AT5G16250.1	Thale cress	plasma membrane	56.74	55.19
GSMUA_Achr10P...	Banana	plastid	57.3	54.84
KRH40258	Soybean	plastid	57.87	54.79
TraesCS1B01G338000.1	Wheat	plasma membrane	51.69	54.44
TraesCS1A01G325000.1	Wheat	plasma membrane	51.69	54.44
KRH00966	Soybean	plasma membrane	57.3	53.68
PGSC0003DMT400060056	Potato	plasma membrane	50.0	51.74
AT3G02640.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	52.81	50.81
PGSC0003DMT400041718	Potato	plasma membrane	53.37	50.26
Solyc08g014350.1.1	Tomato	plasma membrane	50.56	49.72
CDX74612	Canola	extracellular, plasma membrane	50.56	49.18
PGSC0003DMT400059623	Potato	plasma membrane	50.0	49.17
CDY37661	Canola	extracellular, plasma membrane	50.0	48.63
Bra035348.1-P	Field mustard	extracellular, plasma membrane	50.0	48.63
CDY36665	Canola	endoplasmic reticulum, extracellular, plastid	28.09	48.54
Solyc05g055680.2.1	Tomato	plasma membrane	41.01	47.4
CDY15808	Canola	extracellular	21.35	44.71
AT5G36800.2	Thale cress	plasma membrane	50.56	41.28
AT5G36710.2	Thale cress	plasma membrane	50.56	41.28
Solyc11g008690.1.1	Tomato	plasma membrane	53.37	41.13
Os05t0564601-00	Rice	cytosol, nucleus, plastid	34.83	35.23

Protein Annotations

EnsemblPlants:GSMUA_Achr11P11190_001	EnsemblPlants:GSMUA_Achr11T11190_001	EnsemblPlantsGene:GSMUA_Achr11G11190_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR34124	SEG:seg	TMHMM:TMhelix	UniParc:UPI00029597C4	UniProt:M0RR99	MapMan:35.2

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G11190_001]

Coordinates

chr11:-:8878392..8878928

Molecular Weight (calculated)

18997.1 Da

IEP (calculated)

7.535

GRAVY (calculated)

0.521

Length

178 amino acids

Sequence
(BLAST)

001: MGGLSAASSH YCHTHKAFLF CNYTLLGAAT SCVFLTLSLR LLPSACGLLL IALHALTAVA AASACATTPA STPRWHAAHM ASTVLAAIFQ GAVALLALTR
101: APDFLAELRS YVREEDGEVI LKMVGSLGLA VFCLEWVALT LAFALRYHAH VESGDPARRS SKVGGEEELK NWPWPFQV

Best Arabidopsis Sequence Match ( AT5G16250.1 )
(BLAST)

001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.