Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- endoplasmic reticulum 2
- golgi 2
- extracellular 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P20850_001 | Banana | plastid | 80.65 | 81.08 |
| TraesCS2D01G350700.1 | Wheat | plastid | 64.52 | 62.5 |
| TraesCS2B01G371300.1 | Wheat | plastid | 64.52 | 62.5 |
| TraesCS2A01G353400.1 | Wheat | plastid | 63.98 | 61.98 |
| Bra008630.1-P | Field mustard | plasma membrane | 60.75 | 61.75 |
| HORVU2Hr1G085690.1 | Barley | plastid | 63.44 | 61.46 |
| CDX69458 | Canola | plasma membrane | 60.75 | 61.41 |
| CDY26511 | Canola | plasma membrane | 60.22 | 60.87 |
| Zm00001d025762_P001 | Maize | plastid | 62.37 | 60.73 |
| AT5G16250.1 | Thale cress | plasma membrane | 59.68 | 60.66 |
| VIT_00s0499g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 60.75 | 59.79 |
| PGSC0003DMT400041718 | Potato | plasma membrane | 60.75 | 59.79 |
| Bra006345.1-P | Field mustard | plasma membrane | 58.06 | 59.67 |
| Os04t0496300-01 | Rice | plastid | 61.83 | 59.59 |
| CDX70681 | Canola | plasma membrane | 57.53 | 59.12 |
| KRH40258 | Soybean | plastid | 59.68 | 59.04 |
| OQU81867 | Sorghum | plastid | 61.29 | 58.76 |
| CDX78677 | Canola | plasma membrane | 56.99 | 58.56 |
| Zm00001d003172_P001 | Maize | plastid | 60.75 | 58.55 |
| AT3G02640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 57.53 | 57.84 |
| PGSC0003DMT400060056 | Potato | plasma membrane | 53.23 | 57.56 |
| KRH00966 | Soybean | plasma membrane | 58.6 | 57.37 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 54.84 | 57.3 |
| CDX74612 | Canola | extracellular, plasma membrane | 54.84 | 55.74 |
| Bra035348.1-P | Field mustard | extracellular, plasma membrane | 54.84 | 55.74 |
| CDY37661 | Canola | extracellular, plasma membrane | 53.23 | 54.1 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 52.15 | 53.89 |
| Solyc05g055680.2.1 | Tomato | plasma membrane | 43.55 | 52.6 |
| Solyc08g014350.1.1 | Tomato | plasma membrane | 50.54 | 51.93 |
| CDY36665 | Canola | endoplasmic reticulum, extracellular, plastid | 28.49 | 51.46 |
| PGSC0003DMT400059623 | Potato | plasma membrane | 50.0 | 51.38 |
| Solyc11g008690.1.1 | Tomato | plasma membrane | 60.75 | 48.92 |
| AT5G36800.2 | Thale cress | plasma membrane | 54.3 | 46.33 |
| AT5G36710.2 | Thale cress | plasma membrane | 54.3 | 46.33 |
| CDY15808 | Canola | extracellular | 20.97 | 45.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P16400_001 | EnsemblPlants:GSMUA_Achr10T16400_001 | EnsemblPlantsGene:GSMUA_Achr10G16400_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR34124 | PANTHER:PTHR34124:SF2 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002967163 | UniProt:M0RIR5 |
| MapMan:35.2 | : | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G16400_001]
Coordinates
chr10:+:23949153..23949713
Molecular Weight (calculated)
19804.4 Da
IEP (calculated)
8.214
GRAVY (calculated)
0.724
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMMSIASSA PEAASPAHCR AHKAFLLSNY ILLGAASSCI FLTLSLRLFP SLNGFLLILL HGLTIAAAVA GCTAASSSGS SGRWYGAHMV ATVLAAILQG
101: AVAVLVFTRT ADFLAEGLRS YVREEDGVVI LRMVGALCVV IFCMEWMVMA LAFVLRYYAY VDGNAMGRSA NVQQGERASN WQPFQV
101: AVAVLVFTRT ADFLAEGLRS YVREEDGVVI LRMVGALCVV IFCMEWMVMA LAFVLRYYAY VDGNAMGRSA NVQQGERASN WQPFQV
001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.