Factsheet for GSMUA_Achr11P19270_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 3
plasma membrane 4
extracellular 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane, plastid	80.0	80.9
EES18467	Sorghum	extracellular, plasma membrane	56.11	61.21
TraesCS3A01G398800.1	Wheat	plasma membrane	56.67	61.08
TraesCS1D01G325700.1	Wheat	plasma membrane	57.22	60.95
EES04034	Sorghum	extracellular, plasma membrane	54.44	60.87
Zm00001d042527_P001	Maize	plasma membrane	54.44	60.49
Zm00001d038647_P001	Maize	plasma membrane	56.11	60.48
HORVU3Hr1G089620.1	Barley	extracellular, plasma membrane	56.11	60.48
Zm00001d012165_P001	Maize	extracellular, plasma membrane	53.89	60.25
Os05t0507000-01	Rice	extracellular, plasma membrane	55.56	60.24
TraesCS3D01G392800.1	Wheat	plasma membrane	56.11	59.76
TraesCS3B01G431100.1	Wheat	plasma membrane	55.56	59.17
Os01t0896400-01	Rice	extracellular, plasma membrane	54.44	59.04
TraesCS1A01G325000.1	Wheat	plasma membrane	55.0	58.58
Bra008630.1-P	Field mustard	plasma membrane	59.44	58.47
TraesCS1B01G338000.1	Wheat	plasma membrane	54.44	57.99
CDX69458	Canola	plasma membrane	58.89	57.61
CDY26511	Canola	plasma membrane	58.89	57.61
AT5G16250.1	Thale cress	plasma membrane	58.33	57.38
VIT_00s0499g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	60.0	57.14
GSMUA_Achr2P20850_001	Banana	plastid	58.33	56.76
KRH40258	Soybean	plastid	58.89	56.38
Bra006345.1-P	Field mustard	plasma membrane	56.67	56.35
CDX70681	Canola	plasma membrane	56.67	56.35
CDX78677	Canola	plasma membrane	56.67	56.35
KRH00966	Soybean	plasma membrane	58.89	55.79
PGSC0003DMT400060056	Potato	plasma membrane	52.22	54.65
CDY36665	Canola	endoplasmic reticulum, extracellular, plastid	31.11	54.37
GSMUA_Achr10P...	Banana	plastid	53.89	52.15
AT3G02640.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	53.33	51.89
CDY15808	Canola	extracellular	24.44	51.76
CDX74612	Canola	extracellular, plasma membrane	51.67	50.82
CDY37661	Canola	extracellular, plasma membrane	51.67	50.82
PGSC0003DMT400041718	Potato	plasma membrane	53.33	50.79
Bra035348.1-P	Field mustard	extracellular, plasma membrane	51.11	50.27
Solyc08g014350.1.1	Tomato	plasma membrane	50.0	49.72
PGSC0003DMT400059623	Potato	plasma membrane	49.44	49.17
Solyc05g055680.2.1	Tomato	plasma membrane	40.56	47.4
AT5G36800.2	Thale cress	plasma membrane	50.56	41.74
AT5G36710.2	Thale cress	plasma membrane	50.56	41.74
Solyc11g008690.1.1	Tomato	plasma membrane	52.22	40.69
Os05t0564601-00	Rice	cytosol, nucleus, plastid	32.22	32.95

Protein Annotations

EnsemblPlants:GSMUA_Achr11P19270_001	EnsemblPlants:GSMUA_Achr11T19270_001	EnsemblPlantsGene:GSMUA_Achr11G19270_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR34124	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002949180	UniProt:M0RTK7	MapMan:35.2

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G19270_001]

Coordinates

chr11:-:20454288..20454976

Molecular Weight (calculated)

19201.4 Da

IEP (calculated)

7.869

GRAVY (calculated)

0.604

Length

180 amino acids

Sequence
(BLAST)

001: MGATTASHYC HTHKAFLFCN YTLLGAATSC VFLTLSLRLI PSPCGLLLVA LHALTAVAAA SACATTPAST ARWHAAHMAS TVLAAIFHGA ISVLAFTRTP
101: DFLVELRSYV REEDGAVILK MVGGLGLAIF CLEWVALAVA FLLRYHAYVE GGSTATASKR SSKVVGSDEE LKDWPWPFQV

Best Arabidopsis Sequence Match ( AT5G16250.1 )
(BLAST)

001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.