Factsheet for Zm00001d042527_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04034	Sorghum	extracellular, plasma membrane	94.44	95.03
Zm00001d012165_P001	Maize	extracellular, plasma membrane	93.83	94.41
Os01t0896400-01	Rice	extracellular, plasma membrane	87.65	85.54
TraesCS3A01G398800.1	Wheat	plasma membrane	87.65	85.03
HORVU3Hr1G089620.1	Barley	extracellular, plasma membrane	87.04	84.43
TraesCS3D01G392800.1	Wheat	plasma membrane	87.04	83.43
TraesCS3B01G431100.1	Wheat	plasma membrane	87.04	83.43
Zm00001d038647_P001	Maize	plasma membrane	72.84	70.66
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane, plastid	59.88	54.49
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	60.49	54.44
VIT_00s0499g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	52.47	44.97
Bra006345.1-P	Field mustard	plasma membrane	49.38	44.2
Zm00001d025762_P001	Maize	plastid	51.85	43.98
CDX74612	Canola	extracellular, plasma membrane	49.38	43.72
AT5G16250.1	Thale cress	plasma membrane	49.38	43.72
CDY37661	Canola	extracellular, plasma membrane	49.38	43.72
CDX78677	Canola	plasma membrane	48.77	43.65
CDX70681	Canola	plasma membrane	48.77	43.65
Bra035348.1-P	Field mustard	extracellular, plasma membrane	48.77	43.17
PGSC0003DMT400060056	Potato	plasma membrane	45.68	43.02
PGSC0003DMT400041718	Potato	plasma membrane	49.38	42.33
AT3G02640.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	48.15	42.16
KRH40258	Soybean	plastid	48.77	42.02
KRH00966	Soybean	plasma membrane	48.77	41.58
Bra008630.1-P	Field mustard	plasma membrane	46.91	41.53
Zm00001d003172_P001	Maize	plastid	49.38	41.45
CDX69458	Canola	plasma membrane	46.91	41.3
CDY26511	Canola	plasma membrane	46.91	41.3
PGSC0003DMT400059623	Potato	plasma membrane	45.68	40.88
Solyc08g014350.1.1	Tomato	plasma membrane	45.68	40.88
CDY36665	Canola	endoplasmic reticulum, extracellular, plastid	22.84	35.92
AT5G36800.2	Thale cress	plasma membrane	48.15	35.78
AT5G36710.2	Thale cress	plasma membrane	48.15	35.78
Solyc05g055680.2.1	Tomato	plasma membrane	33.95	35.71
Solyc11g008690.1.1	Tomato	plasma membrane	49.38	34.63
CDY15808	Canola	extracellular	13.58	25.88

Protein Annotations

EMBL:BT061896	EMBL:EU967391	EnsemblPlants:Zm00001d042527_P001	EnsemblPlants:Zm00001d042527_T001	EnsemblPlantsGene:Zm00001d042527	EntrezGene:100277214
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR34124	PANTHER:PTHR34124:SF3	PFscan:PS51257
ProteinID:ONM35701.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000182E5CC	UniProt:B6TQX6	MapMan:35.2

Description

No Description!

Coordinates

chr3:+:170872399..170872887

Molecular Weight (calculated)

17292.8 Da

IEP (calculated)

5.474

GRAVY (calculated)

0.514

Length

162 amino acids

Sequence
(BLAST)

001: MAAKSHTRKA FLLCNYVLLG ASSSCIFLTL SLRLLPSPCG LLLLFLHALT AVFSAAGCSG SFTAPATPAQ WHNAHTAGAA LTAIFQGAIA LLAFTRTSDF
101: LAELQSYVRD EDGAVILKMV GGLGTAIFVL EWAALALAFS LRLDEDDDDD DLQAKNWQSY HV

Best Arabidopsis Sequence Match ( AT5G36710.2 )
(BLAST)

001: MYAYKPQIKV NLSRNTKTNI KTPKKNQSSL LEFEKMGMSK SKGNTHNIFL LCNYILLGSA SSCIFLTISL RLFPSLSGLS LIFLYTLTIA TAVSGCSIFA
101: SSTSATASDR LYGSHMVATV LTAIFQGAVS VLIFTRTGDF LRFLKSYVRE EDGEVILKLS GGLCVLMFCL EWIVLVLAFL LKYSDYLDES VVDDDDFKVR
201: RQEEDLKDWP SYPFQLKI

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LDP3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.