Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g014350.1.1 | Tomato | plasma membrane | 94.48 | 94.48 |
| PGSC0003DMT400060056 | Potato | plasma membrane | 58.01 | 61.05 |
| KRH40258 | Soybean | plastid | 59.67 | 57.45 |
| KRH00966 | Soybean | plasma membrane | 58.01 | 55.26 |
| PGSC0003DMT400041718 | Potato | plasma membrane | 55.8 | 53.44 |
| GSMUA_Achr10P... | Banana | plastid | 51.38 | 50.0 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 49.17 | 50.0 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 49.17 | 49.44 |
| GSMUA_Achr2P20850_001 | Banana | plastid | 50.28 | 49.19 |
| Zm00001d038647_P001 | Maize | plasma membrane | 44.75 | 48.5 |
| EES18467 | Sorghum | extracellular, plasma membrane | 43.09 | 47.27 |
| TraesCS1D01G325700.1 | Wheat | plasma membrane | 43.65 | 46.75 |
| TraesCS1B01G338000.1 | Wheat | plasma membrane | 43.09 | 46.15 |
| EES04034 | Sorghum | extracellular, plasma membrane | 40.88 | 45.96 |
| Os05t0507000-01 | Rice | extracellular, plasma membrane | 41.99 | 45.78 |
| Zm00001d042527_P001 | Maize | plasma membrane | 40.88 | 45.68 |
| TraesCS1A01G325000.1 | Wheat | plasma membrane | 42.54 | 45.56 |
| HORVU3Hr1G089620.1 | Barley | extracellular, plasma membrane | 41.99 | 45.51 |
| Zm00001d012165_P001 | Maize | extracellular, plasma membrane | 40.33 | 45.34 |
| TraesCS3A01G398800.1 | Wheat | plasma membrane | 41.44 | 44.91 |
| TraesCS3B01G431100.1 | Wheat | plasma membrane | 41.44 | 44.38 |
| Os01t0896400-01 | Rice | extracellular, plasma membrane | 40.33 | 43.98 |
| TraesCS3D01G392800.1 | Wheat | plasma membrane | 40.88 | 43.79 |
| Os04t0496300-01 | Rice | plastid | 45.86 | 43.01 |
| TraesCS2D01G350700.1 | Wheat | plastid | 45.3 | 42.71 |
| TraesCS2B01G371300.1 | Wheat | plastid | 45.3 | 42.71 |
| HORVU2Hr1G085690.1 | Barley | plastid | 45.3 | 42.71 |
| TraesCS2A01G353400.1 | Wheat | plastid | 44.75 | 42.19 |
| Zm00001d003172_P001 | Maize | plastid | 44.75 | 41.97 |
| Zm00001d025762_P001 | Maize | plastid | 44.2 | 41.88 |
| OQU81867 | Sorghum | plastid | 44.75 | 41.75 |
| Os05t0564601-00 | Rice | cytosol, nucleus, plastid | 27.62 | 28.41 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400059623 | EnsemblPlantsGene:PGSC0003DMG400023170 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR34124 |
| PANTHER:PTHR34124:SF5 | PGSC:PGSC0003DMG400023170 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000296B821 | UniProt:M1C4H7 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400023170]
Coordinates
chr8:-:7455282..7456020
Molecular Weight (calculated)
19710.3 Da
IEP (calculated)
7.501
GRAVY (calculated)
0.623
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MGALPIVTST EFKSHCHPSH QIFRLTNYIL LSASSSCIFL TLSLRLIPSL YGGLFILLHI LTIAGAVPGC TDTATLAGSN NWYAIHMVST VLTAIFQGSS
101: SVLIFTKSYD FLGGLKSYVR EENGVVILKL IGGLSILIFC LEWVVLLLAF ILRYNAFVEG NNGTNSKQEE TLKGHPCPIE V
101: SVLIFTKSYD FLGGLKSYVR EENGVVILKL IGGLSILIFC LEWVVLLLAF ILRYNAFVEG NNGTNSKQEE TLKGHPCPIE V
001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.