Factsheet for GSMUA_Achr2P20850_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 2
mitochondrion 1
plasma membrane 3
golgi 2
nucleus 1
extracellular 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, mitochondrion, nucleus, plasma membrane, plastid
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plastid	81.08	80.65
VIT_00s0499g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	65.95	64.55
AT5G16250.1	Thale cress	plasma membrane	62.16	62.84
Bra006345.1-P	Field mustard	plasma membrane	60.54	61.88
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane, plastid	58.92	61.24
KRH40258	Soybean	plastid	62.16	61.17
PGSC0003DMT400041718	Potato	plasma membrane	62.16	60.85
CDX70681	Canola	plasma membrane	59.46	60.77
CDX78677	Canola	plasma membrane	59.46	60.77
TraesCS2D01G350700.1	Wheat	plastid	62.7	60.42
TraesCS2B01G371300.1	Wheat	plastid	62.7	60.42
Bra008630.1-P	Field mustard	plasma membrane	59.46	60.11
HORVU2Hr1G085690.1	Barley	plastid	62.16	59.9
CDY26511	Canola	plasma membrane	59.46	59.78
CDX69458	Canola	plasma membrane	59.46	59.78
KRH00966	Soybean	plasma membrane	61.08	59.47
AT3G02640.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	59.46	59.46
TraesCS2A01G353400.1	Wheat	plastid	61.62	59.38
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	56.76	58.33
Zm00001d025762_P001	Maize	plastid	59.46	57.59
Os04t0496300-01	Rice	plastid	60.0	57.51
Zm00001d003172_P001	Maize	plastid	60.0	57.51
OQU81867	Sorghum	plastid	59.46	56.7
PGSC0003DMT400060056	Potato	plasma membrane	51.89	55.81
CDX74612	Canola	extracellular, plasma membrane	54.05	54.64
Bra035348.1-P	Field mustard	extracellular, plasma membrane	54.05	54.64
CDY36665	Canola	endoplasmic reticulum, extracellular, plastid	30.27	54.37
CDY37661	Canola	extracellular, plasma membrane	53.51	54.1
Solyc05g055680.2.1	Tomato	plasma membrane	44.32	53.25
PGSC0003DMT400059623	Potato	plasma membrane	49.19	50.28
Solyc08g014350.1.1	Tomato	plasma membrane	49.19	50.28
CDY15808	Canola	extracellular	22.7	49.41
Solyc11g008690.1.1	Tomato	plasma membrane	61.08	48.92
AT5G36800.2	Thale cress	plasma membrane	53.51	45.41
AT5G36710.2	Thale cress	plasma membrane	53.51	45.41

Protein Annotations

EnsemblPlants:GSMUA_Achr2P20850_001	EnsemblPlants:GSMUA_Achr2T20850_001	EnsemblPlantsGene:GSMUA_Achr2G20850_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR34124	PANTHER:PTHR34124:SF2	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002969FE0	UniProt:M0S9S6
MapMan:35.2	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G20850_001]

Coordinates

chr2:+:20547248..20547957

Molecular Weight (calculated)

19707.4 Da

IEP (calculated)

8.059

GRAVY (calculated)

0.737

Length

185 amino acids

Sequence
(BLAST)

001: MGMMSIASSP PEAASPAHCR AHKAFLLCNY VLLGAASSCI FLTLSLRLIP SACGLLLILL HALTIASAIA GCAAASGSSS RWYGAHMVAT VLTAILQGSV
101: AVLVFTRTSD FLADGLRSYV REEDGAVILK MVGALCLVIF CMEWVVMALA FVLRYHTYVD GSGVRRSAKV QQEGDVSNWP WPLQV

Best Arabidopsis Sequence Match ( AT5G16250.1 )
(BLAST)

001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.