CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006345.1-P	Field mustard	plasma membrane	97.79	97.79
CDX78677	Canola	plasma membrane	97.79	97.79
CDX69458	Canola	plasma membrane	86.19	84.78
CDY26511	Canola	plasma membrane	85.64	84.24
AT5G16250.1	Thale cress	plasma membrane	84.53	83.61
AT3G02640.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	77.35	75.68
CDY36665	Canola	endoplasmic reticulum, extracellular, plastid	41.99	73.79
VIT_00s0499g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	74.59	71.43
CDY15808	Canola	extracellular	32.04	68.24
GSMUA_Achr2P20850_001	Banana	plastid	60.77	59.46
GSMUA_Achr10P...	Banana	plastid	59.12	57.53
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane	56.35	56.67
GSMUA_Achr11P...	Banana	endoplasmic reticulum, plasma membrane, plastid	55.25	56.18
CDX74612	Canola	extracellular, plasma membrane	56.35	55.74
CDY37661	Canola	extracellular, plasma membrane	55.25	54.64
EES18467	Sorghum	extracellular, plasma membrane	46.96	51.52
TraesCS2D01G350700.1	Wheat	plastid	53.59	50.52
TraesCS2B01G371300.1	Wheat	plastid	53.59	50.52
EES04034	Sorghum	extracellular, plasma membrane	44.75	50.31
HORVU3Hr1G089620.1	Barley	extracellular, plasma membrane	46.41	50.3
Os01t0896400-01	Rice	extracellular, plasma membrane	45.86	50.0
TraesCS2A01G353400.1	Wheat	plastid	53.04	50.0
OQU81867	Sorghum	plastid	53.59	50.0
TraesCS3A01G398800.1	Wheat	plasma membrane	45.86	49.7
Zm00001d038647_P001	Maize	plasma membrane	45.86	49.7
HORVU2Hr1G085690.1	Barley	plastid	52.49	49.48
Zm00001d003172_P001	Maize	plastid	52.49	49.22
TraesCS3B01G431100.1	Wheat	plasma membrane	45.86	49.11
Zm00001d042527_P001	Maize	plasma membrane	43.65	48.77
Os04t0496300-01	Rice	plastid	51.93	48.7
Zm00001d025762_P001	Maize	plastid	51.38	48.69
TraesCS1A01G325000.1	Wheat	plasma membrane	45.3	48.52
TraesCS3D01G392800.1	Wheat	plasma membrane	45.3	48.52
TraesCS1D01G325700.1	Wheat	plasma membrane	44.75	47.93
Zm00001d012165_P001	Maize	extracellular, plasma membrane	42.54	47.83
Os05t0507000-01	Rice	extracellular, plasma membrane	43.65	47.59
TraesCS1B01G338000.1	Wheat	plasma membrane	43.65	46.75
Os05t0564601-00	Rice	cytosol, nucleus, plastid	28.18	28.98

Protein Annotations

EnsemblPlants:CDX70681	EnsemblPlantsGene:GSBRNA2T00140544001	GO:A0A078C152	PANTHER:PTHR34124	PANTHER:PTHR34124:SF2	ProteinID:CDX70681
ProteinID:CDX70681.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EAEFF7	MapMan:35.2	:

Description

BnaC03g07650D

Coordinates

chrLK031791:-:1521448..1522206

Molecular Weight (calculated)

19745.2 Da

IEP (calculated)

7.767

GRAVY (calculated)

0.638

Length

181 amino acids

Sequence
(BLAST)

001: MGLISSPSVD ESHYHTHKIF LFANYILLGT ASSCIFLTLS LRLIPSVCGF LLILLHATTI AAAISGCTAA SCGRNRWYAA HMVATVLTAI FQGSVSVLIF
101: TNTANFLGSL KSYVREDDAA VILKLCGGLC VAIFCLEWVV LVLGFFLKYY GYVEGGDSNM KRTGKVQSEE NLKEWPLSFQ V

Best Arabidopsis Sequence Match ( AT5G16250.1 )
(BLAST)

001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.