Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36665 | Canola | endoplasmic reticulum, extracellular, plastid | 78.82 | 65.05 |
| CDX69458 | Canola | plasma membrane | 81.18 | 37.5 |
| CDY26511 | Canola | plasma membrane | 81.18 | 37.5 |
| Bra008630.1-P | Field mustard | plasma membrane | 77.65 | 36.07 |
| AT5G16250.1 | Thale cress | plasma membrane | 71.76 | 33.33 |
| CDX70681 | Canola | plasma membrane | 68.24 | 32.04 |
| CDX78677 | Canola | plasma membrane | 67.06 | 31.49 |
| VIT_00s0499g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 64.71 | 29.1 |
| AT3G02640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 58.82 | 27.03 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane | 51.76 | 24.44 |
| GSMUA_Achr2P20850_001 | Banana | plastid | 49.41 | 22.7 |
| CDX74612 | Canola | extracellular, plasma membrane | 48.24 | 22.4 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 44.71 | 21.35 |
| CDY37661 | Canola | extracellular, plasma membrane | 45.88 | 21.31 |
| GSMUA_Achr10P... | Banana | plastid | 45.88 | 20.97 |
| TraesCS2D01G350700.1 | Wheat | plastid | 44.71 | 19.79 |
| TraesCS2B01G371300.1 | Wheat | plastid | 44.71 | 19.79 |
| TraesCS2A01G353400.1 | Wheat | plastid | 44.71 | 19.79 |
| OQU81867 | Sorghum | plastid | 44.71 | 19.59 |
| Os04t0496300-01 | Rice | plastid | 43.53 | 19.17 |
| Zm00001d003172_P001 | Maize | plastid | 43.53 | 19.17 |
| HORVU2Hr1G085690.1 | Barley | plastid | 42.35 | 18.75 |
| Zm00001d025762_P001 | Maize | plastid | 40.0 | 17.8 |
| TraesCS1D01G325700.1 | Wheat | plasma membrane | 32.94 | 16.57 |
| TraesCS1A01G325000.1 | Wheat | plasma membrane | 31.76 | 15.98 |
| TraesCS1B01G338000.1 | Wheat | plasma membrane | 31.76 | 15.98 |
| EES18467 | Sorghum | extracellular, plasma membrane | 30.59 | 15.76 |
| Zm00001d038647_P001 | Maize | plasma membrane | 30.59 | 15.57 |
| TraesCS3D01G392800.1 | Wheat | plasma membrane | 30.59 | 15.38 |
| Os01t0896400-01 | Rice | extracellular, plasma membrane | 29.41 | 15.06 |
| Os05t0507000-01 | Rice | extracellular, plasma membrane | 29.41 | 15.06 |
| TraesCS3A01G398800.1 | Wheat | plasma membrane | 29.41 | 14.97 |
| HORVU3Hr1G089620.1 | Barley | extracellular, plasma membrane | 29.41 | 14.97 |
| TraesCS3B01G431100.1 | Wheat | plasma membrane | 29.41 | 14.79 |
| Os05t0564601-00 | Rice | cytosol, nucleus, plastid | 30.59 | 14.77 |
| Zm00001d012165_P001 | Maize | extracellular, plasma membrane | 27.06 | 14.29 |
| EES04034 | Sorghum | extracellular, plasma membrane | 27.06 | 14.29 |
| Zm00001d042527_P001 | Maize | plasma membrane | 25.88 | 13.58 |
Protein Annotations
| EnsemblPlants:CDY15808 | EnsemblPlantsGene:GSBRNA2T00090131001 | PANTHER:PTHR34124 | PANTHER:PTHR34124:SF2 | ProteinID:CDY15808 | ProteinID:CDY15808.1 |
| UniParc:UPI0004EF3159 | UniProt:A0A078FTW9 | MapMan:35.2 | : | : | : |
Description
BnaC02g34270DBnaC02g34270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FTW9]
Coordinates
chrLK032058:+:325793..327300
Molecular Weight (calculated)
9358.9 Da
IEP (calculated)
4.651
GRAVY (calculated)
-0.262
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: MVATVITAIF QGSVSVLIFT NTANFLGSLK SYVREEDAAY YAYVEGGGDR SVAVKRSGKV QSDENPKDWP WPFQNKEYGS VVTSE
001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.