Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025762_P001 | Maize | plastid | 93.78 | 94.76 |
| TraesCS2D01G350700.1 | Wheat | plastid | 91.19 | 91.67 |
| TraesCS2B01G371300.1 | Wheat | plastid | 91.19 | 91.67 |
| HORVU2Hr1G085690.1 | Barley | plastid | 90.67 | 91.15 |
| TraesCS2A01G353400.1 | Wheat | plastid | 90.16 | 90.62 |
| Os04t0496300-01 | Rice | plastid | 90.16 | 90.16 |
| GSMUA_Achr10P... | Banana | plastid | 58.55 | 60.75 |
| GSMUA_Achr2P20850_001 | Banana | plastid | 57.51 | 60.0 |
| VIT_00s0499g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 52.85 | 53.97 |
| AT5G16250.1 | Thale cress | plasma membrane | 50.78 | 53.55 |
| Bra008630.1-P | Field mustard | plasma membrane | 50.78 | 53.55 |
| CDX69458 | Canola | plasma membrane | 50.78 | 53.26 |
| CDY26511 | Canola | plasma membrane | 50.26 | 52.72 |
| CDX70681 | Canola | plasma membrane | 49.22 | 52.49 |
| Bra006345.1-P | Field mustard | plasma membrane | 48.7 | 51.93 |
| CDX78677 | Canola | plasma membrane | 48.7 | 51.93 |
| KRH40258 | Soybean | plastid | 50.26 | 51.6 |
| CDY36665 | Canola | endoplasmic reticulum, extracellular, plastid | 27.46 | 51.46 |
| PGSC0003DMT400041718 | Potato | plasma membrane | 50.26 | 51.32 |
| KRH00966 | Soybean | plasma membrane | 50.26 | 51.05 |
| AT3G02640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 48.7 | 50.81 |
| Zm00001d038647_P001 | Maize | plasma membrane | 43.52 | 50.3 |
| Zm00001d012165_P001 | Maize | extracellular, plasma membrane | 41.45 | 49.69 |
| PGSC0003DMT400060056 | Potato | plasma membrane | 44.04 | 49.42 |
| Zm00001d042527_P001 | Maize | plasma membrane | 41.45 | 49.38 |
| Solyc05g055680.2.1 | Tomato | plasma membrane | 38.34 | 48.05 |
| CDX74612 | Canola | extracellular, plasma membrane | 45.08 | 47.54 |
| Bra035348.1-P | Field mustard | extracellular, plasma membrane | 44.56 | 46.99 |
| CDY37661 | Canola | extracellular, plasma membrane | 44.04 | 46.45 |
| PGSC0003DMT400059623 | Potato | plasma membrane | 41.97 | 44.75 |
| Solyc08g014350.1.1 | Tomato | plasma membrane | 41.97 | 44.75 |
| CDY15808 | Canola | extracellular | 19.17 | 43.53 |
| Solyc11g008690.1.1 | Tomato | plasma membrane | 49.22 | 41.13 |
| AT5G36710.2 | Thale cress | plasma membrane | 44.04 | 38.99 |
| AT5G36800.2 | Thale cress | plasma membrane | 44.04 | 38.99 |
Protein Annotations
| EnsemblPlants:Zm00001d003172_P001 | EnsemblPlants:Zm00001d003172_T001 | EnsemblPlantsGene:Zm00001d003172 | EntrezGene:100277137 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR34124 | PANTHER:PTHR34124:SF2 | ProteinID:ONM16305.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000221D43D | UniProt:A0A1D6E788 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr2:+:34447811..34448392
Molecular Weight (calculated)
20401.0 Da
IEP (calculated)
8.596
GRAVY (calculated)
0.522
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGLSVIAPP ARDSASPQHR RARRAFLVSN YLILGCASGC GFLTLSLRLA PSVDGFLLIL LHALTVAAAV AGCAVIAAPD PPRGRCYTVH MSATVVVSIL
101: QGAAAVLAFS RTSEFLSDGL KSYVREEDGA VILRMVGGLG VGIFCLEWVA LALAFVLRYY VYVDRECGGN PMRRSAKVGG EDGAGTWPWP FQV
101: QGAAAVLAFS RTSEFLSDGL KSYVREEDGA VILRMVGGLG VGIFCLEWVA LALAFVLRYY VYVDRECGGN PMRRSAKVGG EDGAGTWPWP FQV
001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV
Arabidopsis Description
Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.