Factsheet for Os04t0496300-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 2
golgi 2
plasma membrane 3
extracellular 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	golgi, plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G350700.1	Wheat	plastid	92.23	92.71
TraesCS2B01G371300.1	Wheat	plastid	92.23	92.71
HORVU2Hr1G085690.1	Barley	plastid	92.23	92.71
TraesCS2A01G353400.1	Wheat	plastid	91.19	91.67
OQU81867	Sorghum	plastid	90.67	90.21
Zm00001d003172_P001	Maize	plastid	90.16	90.16
Zm00001d025762_P001	Maize	plastid	89.12	90.05
GSMUA_Achr10P...	Banana	plastid	59.59	61.83
GSMUA_Achr2P20850_001	Banana	plastid	57.51	60.0
AT5G16250.1	Thale cress	plasma membrane	51.81	54.64
VIT_00s0499g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane, plastid	53.37	54.5
Os05t0507000-01	Rice	extracellular, plasma membrane	46.11	53.61
Bra008630.1-P	Field mustard	plasma membrane	50.78	53.55
CDX69458	Canola	plasma membrane	50.78	53.26
PGSC0003DMT400041718	Potato	plasma membrane	51.81	52.91
CDY26511	Canola	plasma membrane	50.26	52.72
KRH40258	Soybean	plastid	50.78	52.13
CDX70681	Canola	plasma membrane	48.7	51.93
KRH00966	Soybean	plasma membrane	50.78	51.58
CDX78677	Canola	plasma membrane	48.19	51.38
Bra006345.1-P	Field mustard	plasma membrane	48.19	51.38
AT3G02640.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	49.22	51.35
PGSC0003DMT400060056	Potato	plasma membrane	45.08	50.58
CDY36665	Canola	endoplasmic reticulum, extracellular, plastid	26.94	50.49
Os01t0896400-01	Rice	extracellular, plasma membrane	43.01	50.0
Solyc05g055680.2.1	Tomato	plasma membrane	38.34	48.05
CDX74612	Canola	extracellular, plasma membrane	44.04	46.45
Bra035348.1-P	Field mustard	extracellular, plasma membrane	43.52	45.9
PGSC0003DMT400059623	Potato	plasma membrane	43.01	45.86
Solyc08g014350.1.1	Tomato	plasma membrane	43.01	45.86
CDY37661	Canola	extracellular, plasma membrane	43.01	45.36
CDY15808	Canola	extracellular	19.17	43.53
Solyc11g008690.1.1	Tomato	plasma membrane	50.78	42.42
AT5G36800.2	Thale cress	plasma membrane	44.04	38.99
AT5G36710.2	Thale cress	plasma membrane	44.04	38.99
Os05t0564601-00	Rice	cytosol, nucleus, plastid	27.46	30.11

Protein Annotations

EMBL:AK062810	EnsemblPlants:Os04t0496300-01	EnsemblPlantsGene:Os04g0496300	EntrezGene:4336278	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR34124	PANTHER:PTHR34124:SF2	ProteinID:BAF15113.1	ProteinID:BAS89891.1	ProteinID:CAE03111.2
RefSeq:XP_015634380.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000021C6DA	UniProt:Q7XQI2	MapMan:35.2

Description

Similar to H0306B06.4 protein. (Os04t0496300-01)

Coordinates

chr4:-:24830462..24831375

Molecular Weight (calculated)

20270.8 Da

IEP (calculated)

8.629

GRAVY (calculated)

0.564

Length

193 amino acids

Sequence
(BLAST)

001: MGGLSVIAPP AGDSASPAHR RARRAFLVSN YMILGAASGC GFLTLSLRLV PSVDGFLLIL LHAITVAAAV AGCAVIAAPD PPRGRVYTTH MAGTVFVSIL
101: QGAAAVLTFS RTSDFLADGL KSYVREEDGA VILRMIGGLG VAIFCLEWIA LALAFVLRYY AYVDRECGGN PLRRSAKVGG EDGAGTWPWP FQV

Best Arabidopsis Sequence Match ( AT5G16250.1 )
(BLAST)

001: MGFISSSSPV EESHYHTHKI FLFSNYILLG AASSCIFLTL SLRLIPSICG FLLILLHATT IAAAVSGCAA ASCGRNRWYA AHMVATVLTA IFQGSVSVLI
101: FTNTSKFLGS LKSYVREEDA AVILKLGGGL CIVIFCLDWI VLVCAFFLKY YAYVDGGDGV AMKRTGKVQS EENPKDWPWP FQV

Arabidopsis Description

Transmembrane protein [Source:UniProtKB/TrEMBL;Acc:Q9LF03]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.