Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d016248_P001 | |
| Zm00001d044417_P001 | |
| Zm00001d045580_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G22220.1 | Zm00001d016248_P001 | AT2G42790.1 | 21798944 |
| AT4G22220.1 | Zm00001d045580_P001 | AT4G25680.1 | 21798944 |
| AT4G22220.1 | Zm00001d044417_P001 | AT5G06410.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043971_P001 | Maize | mitochondrion | 67.24 | 43.33 |
| EES03388 | Sorghum | mitochondrion | 66.38 | 42.54 |
| Os01t0662600-02 | Rice | mitochondrion | 58.62 | 39.77 |
| Zm00001d011514_P001 | Maize | mitochondrion | 66.38 | 38.5 |
| TraesCS3D01G240900.1 | Wheat | mitochondrion | 57.76 | 38.29 |
| TraesCS3B01G268800.1 | Wheat | mitochondrion | 57.76 | 37.85 |
| TraesCS3A01G240500.1 | Wheat | mitochondrion | 56.9 | 37.71 |
| Solyc07g007450.2.1 | Tomato | mitochondrion | 48.28 | 34.15 |
| KRH03283 | Soybean | mitochondrion | 48.28 | 33.94 |
| PGSC0003DMT400046740 | Potato | mitochondrion | 48.28 | 33.73 |
| Solyc03g112900.2.1 | Tomato | mitochondrion | 48.28 | 33.73 |
| KRH57077 | Soybean | mitochondrion | 47.41 | 33.33 |
| AT3G01020.1 | Thale cress | mitochondrion | 46.55 | 33.13 |
| Bra013601.1-P | Field mustard | mitochondrion | 44.83 | 32.7 |
| AT4G22220.1 | Thale cress | mitochondrion | 45.69 | 31.74 |
| Bra020855.1-P | Field mustard | mitochondrion | 44.83 | 31.71 |
| KRH19966 | Soybean | mitochondrion | 46.55 | 31.4 |
| KRH54391 | Soybean | mitochondrion | 45.69 | 30.81 |
| AT4G04080.1 | Thale cress | mitochondrion | 42.24 | 28.66 |
| Bra029483.1-P | Field mustard | cytosol, mitochondrion, plastid | 26.72 | 26.96 |
| GSMUA_Achr6P22070_001 | Banana | cytosol | 22.41 | 25.74 |
| PGSC0003DMT400078947 | Potato | mitochondrion | 48.28 | 25.45 |
| PGSC0003DMT400035008 | Potato | mitochondrion | 21.55 | 15.92 |
| Zm00001d029638_P001 | Maize | cytosol | 0.86 | 1.27 |
| Zm00001d043816_P001 | Maize | cytosol, plastid | 0.86 | 1.27 |
Protein Annotations
| Gene3D:3.90.1010.10 | MapMan:7.11.2.1.2 | UniProt:A0A1D6KF94 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016226 |
| GO:GO:0051536 | InterPro:NIF_FeS_clus_asmbl_NifU_N | ProteinID:ONM01802.1 | PFAM:PF01592 | PANTHER:PTHR10093 | PANTHER:PTHR10093:SF8 |
| SUPFAM:SSF82649 | SignalP:SignalP-noTM | UniParc:UPI000220DE47 | EnsemblPlantsGene:Zm00001d030959 | EnsemblPlants:Zm00001d030959_P001 | EnsemblPlants:Zm00001d030959_T001 |
Description
Iron-sulfur cluster assembly protein 1
Coordinates
chr1:-:169192699..169193565
Molecular Weight (calculated)
12657.0 Da
IEP (calculated)
5.543
GRAVY (calculated)
-0.135
Length
116 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRTGGRWLL APGLWWRGLG TGATTYVDLA TTTAGVSAYH EQVMDHYNNP WNIGSFNKDD PNVDTGLVGA SACVDIMKLQ IYVDKDSNKI VDACFKTFGC
101: GSTIVSSPHR CELNID
101: GSTIVSSPHR CELNID
001: MMLKQAAKKA LGLTSRQSTP WSVGILRTYH ENVIDHYDNP RNVGSFDKND PNVGTGLVGA PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA
Arabidopsis Description
ISU1Iron-sulfur cluster assembly protein [Source:UniProtKB/TrEMBL;Acc:A0A178UZH3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.