Factsheet for Bra020855.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004720.1-P
Bra005895.1-P
Bra009192.1-P
Bra010452.1-P
Bra013908.1-P
Bra013910.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22220.1	Bra004720.1-P	AT2G42790.1	21798944
AT4G22220.1	Bra010452.1-P	AT4G25680.1	21798944
AT4G22220.1	Bra013908.1-P	AT4G25680.1	21798944
AT4G22220.1	Bra013910.1-P	AT4G25680.1	21798944
AT4G22220.1	Bra005895.1-P	AT5G06410.1	21798944
AT4G22220.1	Bra009192.1-P	AT5G06410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76383	Canola	mitochondrion	98.17	98.17
Bra013601.1-P	Field mustard	mitochondrion	92.07	94.97
AT4G22220.1	Thale cress	mitochondrion	92.07	90.42
KRH57077	Soybean	mitochondrion	77.44	76.97
GSMUA_Achr6P22070_001	Banana	cytosol	46.95	76.24
GSMUA_Achr10P...	Banana	cytosol	48.78	76.19
KRH03283	Soybean	mitochondrion	76.22	75.76
GSMUA_Achr6P09070_001	Banana	mitochondrion	75.0	72.35
PGSC0003DMT400046740	Potato	mitochondrion	72.56	71.69
KRH54391	Soybean	mitochondrion	75.0	71.51
Bra029483.1-P	Field mustard	cytosol, mitochondrion, plastid	50.0	71.3
Solyc03g112900.2.1	Tomato	mitochondrion	71.95	71.08
KRH19966	Soybean	mitochondrion	73.78	70.35
Solyc07g007450.2.1	Tomato	mitochondrion	68.9	68.9
VIT_01s0127g00450.t01	Wine grape	mitochondrion	53.05	67.97
Os01t0662600-02	Rice	mitochondrion	70.73	67.84
TraesCS1D01G414700.1	Wheat	mitochondrion	68.29	66.67
TraesCS1B01G436500.1	Wheat	mitochondrion	67.07	65.87
Os05t0568100-01	Rice	mitochondrion	68.9	65.7
TraesCS3D01G240900.1	Wheat	mitochondrion	69.51	65.14
Zm00001d043971_P001	Maize	mitochondrion	71.34	65.0
EES03388	Sorghum	mitochondrion	71.34	64.64
TraesCS3A01G240500.1	Wheat	mitochondrion	68.9	64.57
TraesCS3B01G268800.1	Wheat	mitochondrion	69.51	64.41
TraesCS1A01G406300.1	Wheat	mitochondrion	67.07	63.95
Zm00001d029638_P001	Maize	cytosol	28.05	58.23
HORVU1Hr1G089730.1	Barley	cytosol, nucleus	67.68	58.12
Zm00001d043816_P001	Maize	cytosol, plastid	27.44	56.96
Zm00001d011514_P001	Maize	mitochondrion	64.02	52.5
KXG22553	Sorghum	plastid	69.51	51.12
PGSC0003DMT400078947	Potato	mitochondrion	68.29	50.91
Zm00001d030959_P001	Maize	extracellular, mitochondrion	31.71	44.83
PGSC0003DMT400035008	Potato	mitochondrion	26.22	27.39
HORVU3Hr1G059830.7	Barley	mitochondrion	28.05	18.18

Protein Annotations

Gene3D:3.90.1010.10	MapMan:7.11.2.1.2	EnsemblPlantsGene:Bra020855	EnsemblPlants:Bra020855.1	EnsemblPlants:Bra020855.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005759	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016226	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	InterPro:ISC_FeS_clus_asmbl_IscU
UniProt:M4DWG1	InterPro:NIF_FeS_clus_asmbl_NifU_N	PFAM:PF01592	PANTHER:PTHR10093	PANTHER:PTHR10093:SF8	SUPFAM:SSF82649
TIGRFAMs:TIGR01999	UniParc:UPI0002545E04	:	:	:	:

Description

AT4G22220 (E=1e-084) ISU1, ATISU1 | ISU1; structural molecule

Coordinates

chrA08:-:11670421..11671696

Molecular Weight (calculated)

17705.3 Da

IEP (calculated)

9.492

GRAVY (calculated)

-0.337

Length

164 amino acids

Sequence
(BLAST)

001: MMLRQAAKKA LGLTSRQSTP WSVGISRSYH ENVIDHYDNP RNVGSFDKND PSIGTGLVGA PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA
101: TEWVKGKAME EVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRLKTNGVGE SSQA

Best Arabidopsis Sequence Match ( AT4G22220.1 )
(BLAST)

001: MMLKQAAKKA LGLTSRQSTP WSVGILRTYH ENVIDHYDNP RNVGSFDKND PNVGTGLVGA PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA

Arabidopsis Description

ISU1Iron-sulfur cluster assembly protein [Source:UniProtKB/TrEMBL;Acc:A0A178UZH3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.