Factsheet for Os05t0568100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0232400-01
Os06t0107000-01
Os12t0456200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22220.1	Os02t0232400-01	AT2G42790.1	21798944
AT4G22220.1	Os06t0107000-01	AT4G25680.1	21798944
AT4G22220.1	Os12t0456200-01	AT5G06410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G436500.1	Wheat	mitochondrion	76.16	78.44
TraesCS1D01G414700.1	Wheat	mitochondrion	76.16	77.98
Os01t0662600-02	Rice	mitochondrion	76.74	77.19
TraesCS1A01G406300.1	Wheat	mitochondrion	76.16	76.16
Solyc03g112900.2.1	Tomato	mitochondrion	71.51	74.1
PGSC0003DMT400046740	Potato	mitochondrion	70.35	72.89
VIT_01s0127g00460.t01	Wine grape	cytosol, endoplasmic reticulum	21.51	72.55
KRH57077	Soybean	mitochondrion	69.19	72.12
KRH03283	Soybean	mitochondrion	68.6	71.52
Solyc07g007450.2.1	Tomato	mitochondrion	67.44	70.73
Bra013601.1-P	Field mustard	mitochondrion	65.12	70.44
Bra020855.1-P	Field mustard	mitochondrion	65.7	68.9
HORVU1Hr1G089730.1	Barley	cytosol, nucleus	76.16	68.59
AT4G22220.1	Thale cress	mitochondrion	65.7	67.66
KRH54391	Soybean	mitochondrion	67.44	67.44
KRH19966	Soybean	mitochondrion	66.86	66.86
Bra029483.1-P	Field mustard	cytosol, mitochondrion, plastid	44.19	66.09
Zm00001d029638_P001	Maize	cytosol	29.65	64.56
Zm00001d043816_P001	Maize	cytosol, plastid	29.07	63.29
AT3G01020.1	Thale cress	mitochondrion	59.3	62.58
AT4G04080.1	Thale cress	mitochondrion	60.47	60.82
KXG22553	Sorghum	plastid	76.74	59.19
PGSC0003DMT400078947	Potato	mitochondrion	67.44	52.73
PGSC0003DMT400035008	Potato	mitochondrion	29.07	31.85
CDX94083	Canola	nucleus	36.05	21.16

Protein Annotations

Gene3D:3.90.1010.10	EntrezGene:4339646	MapMan:7.11.2.1.2	ProteinID:AAT93925.1	ProteinID:AAU10671.1	EMBL:AK069724
ProteinID:BAF18269.1	ProteinID:BAS95396.1	ProteinID:EEE64729.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005506	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005759	GO:GO:0006879	GO:GO:0008150	GO:GO:0008152	GO:GO:0008198	GO:GO:0009058
GO:GO:0009987	GO:GO:0016043	GO:GO:0016226	GO:GO:0016740	GO:GO:0019538	GO:GO:0019725
GO:GO:0036455	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	GO:GO:0051539	GO:GO:0097428
InterPro:ISC_FeS_clus_asmbl_IscU	InterPro:NIF_FeS_clus_asmbl_NifU_N	EnsemblPlantsGene:Os05g0568100	EnsemblPlants:Os05t0568100-01	PFAM:PF01592	PANTHER:PTHR10093
PANTHER:PTHR10093:SF8	UniProt:Q6AUN9	SUPFAM:SSF82649	TIGRFAMs:TIGR01999	UniParc:UPI0000403636	RefSeq:XP_015637820.1
SEG:seg	:	:	:	:	:

Description

IRON-SULFUR CLUSTER PROTEIN 5Similar to Iron sulfur cluster assembly protein 1, mitochondrial precursor (Iron sulfur cluster scaffold protein 1). (Os05t0568100-01)

Coordinates

chr5:+:28289829..28293256

Molecular Weight (calculated)

17977.5 Da

IEP (calculated)

8.328

GRAVY (calculated)

-0.220

Length

172 amino acids

Sequence
(BLAST)

001: MLRAAGKRLL GVGLRPAGGG AGEAAAAAAA SAVAVVRRRG YHERVVDHYD NPRNVGTFDK DDPDVGTGLV GAPACGDVMK LQIRVDEESG RIVDACFKTF
101: GCGSAIASSS VASEWVKGKQ MEDAASIKNS EIAKHLSLPP VKLHCSMLAE DAIKAAVKDY EAKKAKLDKG NE

Best Arabidopsis Sequence Match ( AT4G22220.1 )
(BLAST)

001: MMLKQAAKKA LGLTSRQSTP WSVGILRTYH ENVIDHYDNP RNVGSFDKND PNVGTGLVGA PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA

Arabidopsis Description

ISU1Iron-sulfur cluster assembly protein [Source:UniProtKB/TrEMBL;Acc:A0A178UZH3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.