Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 3
- endoplasmic reticulum 3
- cytosol 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029638_P001 | Maize | cytosol | 70.59 | 45.57 |
| Zm00001d043816_P001 | Maize | cytosol, plastid | 68.63 | 44.3 |
| TraesCS1B01G436500.1 | Wheat | mitochondrion | 70.59 | 21.56 |
| Os05t0568100-01 | Rice | mitochondrion | 72.55 | 21.51 |
| TraesCS1D01G414700.1 | Wheat | mitochondrion | 70.59 | 21.43 |
| TraesCS1A01G406300.1 | Wheat | mitochondrion | 70.59 | 20.93 |
| KXG22553 | Sorghum | plastid | 70.59 | 16.14 |
| HORVU3Hr1G059830.7 | Barley | mitochondrion | 68.63 | 13.83 |
| CDX94083 | Canola | nucleus | 58.82 | 10.24 |
| VIT_01s0127g00450.t01 | Wine grape | mitochondrion | 7.84 | 3.12 |
Protein Annotations
| Gene3D:3.90.1010.10 | MapMan:7.11.2.1.2 | ProteinID:CCB51792 | ProteinID:CCB51792.1 | ncoils:Coil | UniProt:F6HHV5 |
| EMBL:FN595761 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016226 | GO:GO:0051536 | InterPro:NIF_FeS_clus_asmbl_NifU_N |
| PFAM:PF01592 | PANTHER:PTHR10093 | PANTHER:PTHR10093:SF8 | SUPFAM:SSF82649 | UniParc:UPI00021084B2 | ArrayExpress:VIT_01s0127g00460 |
| EnsemblPlantsGene:VIT_01s0127g00460 | EnsemblPlants:VIT_01s0127g00460.t01 | : | : | : | : |
Description
No Description!
Coordinates
chr1:+:7821709..7823555
Molecular Weight (calculated)
5825.2 Da
IEP (calculated)
8.502
GRAVY (calculated)
-0.076
Length
51 amino acids
Sequence
(BLAST)
(BLAST)
1: MDFLTVAYLH KLWEIAKHLS LPPVKLHCSM LAEDAIKAAV KDYEAKRAKT E
001: MMLKQAAKKA LGLTSRQSTP WSVGILRTYH ENVIDHYDNP RNVGSFDKND PNVGTGLVGA PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA
Arabidopsis Description
ISU1Iron-sulfur cluster assembly protein [Source:UniProtKB/TrEMBL;Acc:A0A178UZH3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.