Factsheet for HORVU3Hr1G059830.7

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G030280.2
HORVU5Hr1G099820.5
HORVU7Hr1G002080.2
HORVU7Hr1G043340.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22220.1	HORVU0Hr1G030280.2	AT2G42790.1	21798944
AT4G22220.1	HORVU5Hr1G099820.5	AT2G42790.1	21798944
AT4G22220.1	HORVU7Hr1G002080.2	AT4G25680.1	21798944
AT4G22220.1	HORVU7Hr1G043340.3	AT5G06410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0127g00460.t01	Wine grape	cytosol, endoplasmic reticulum	13.83	68.63
Zm00001d029638_P001	Maize	cytosol	16.21	51.9
Zm00001d043816_P001	Maize	cytosol, plastid	15.81	50.63
Bra029483.1-P	Field mustard	cytosol, mitochondrion, plastid	16.21	35.65
KRH57077	Soybean	mitochondrion	21.34	32.73
KRH03283	Soybean	mitochondrion	20.95	32.12
KRH19966	Soybean	mitochondrion	21.34	31.4
PGSC0003DMT400046740	Potato	mitochondrion	20.55	31.33
Solyc03g112900.2.1	Tomato	mitochondrion	20.16	30.72
KRH54391	Soybean	mitochondrion	20.55	30.23
Bra013601.1-P	Field mustard	mitochondrion	17.79	28.3
AT4G22220.1	Thale cress	mitochondrion	18.58	28.14
Bra020855.1-P	Field mustard	mitochondrion	18.18	28.05
Solyc07g007450.2.1	Tomato	mitochondrion	18.18	28.05
AT3G01020.1	Thale cress	mitochondrion	17.79	27.61
HORVU1Hr1G089730.1	Barley	cytosol, nucleus	20.55	27.23
AT4G04080.1	Thale cress	mitochondrion	16.6	24.56
PGSC0003DMT400078947	Potato	mitochondrion	18.58	21.36
PGSC0003DMT400035008	Potato	mitochondrion	11.07	17.83
CDX94083	Canola	nucleus	17.39	15.02
HORVU2Hr1G019850.37	Barley	mitochondrion	9.09	13.69

Protein Annotations

EnsemblPlants:HORVU3Hr1G059830.7	EnsemblPlantsGene:HORVU3Hr1G059830	Gene3D:3.90.1010.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016226
GO:GO:0051536	InterPro:NIF_FeS_clus_asmbl_NifU_N	PANTHER:PTHR10093	PANTHER:PTHR10093:SF8	PFAM:PF01592	SEG:seg
SUPFAM:SSF82649	UniParc:UPI000B46A5E6	UniProt:A0A287L8S0	MapMan:7.11.2.1.2	:	:

Description

No Description!

Coordinates

chrchr3H:-:454709633..454712461

Molecular Weight (calculated)

28258.0 Da

IEP (calculated)

12.248

GRAVY (calculated)

-1.140

Length

253 amino acids

Sequence
(BLAST)

001: NREVLSRNST PRLQSSHRAR FALAPPRTGS PPLPRPHKLS KPPQFHKFAS PLFPQAKQPI QSRRTSEESR GTPEFVGDVA RGRKPARRAR TPALPRPGRR
101: REGRAGAGGG GGEGVPRAGG GPLQQPAERG VLRQGRPQRR HRAGRRAGLR RRHEAADPCR RRHREDRRRL LQDLRLRLRN RVILRRYRMG EGKANGGSSE
201: YQEHVEIAKH LSLPPVKLHC SMLAEDAIKA AVKDYESKKA KLGDSPAEKA AEA

Best Arabidopsis Sequence Match ( AT4G22220.1 )
(BLAST)

001: MMLKQAAKKA LGLTSRQSTP WSVGILRTYH ENVIDHYDNP RNVGSFDKND PNVGTGLVGA PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA

Arabidopsis Description

ISU1Iron-sulfur cluster assembly protein [Source:UniProtKB/TrEMBL;Acc:A0A178UZH3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.