Factsheet for Zm00001d043816_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d016248_P001
Zm00001d044417_P001
Zm00001d045580_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22220.1	Zm00001d016248_P001	AT2G42790.1	21798944
AT4G22220.1	Zm00001d045580_P001	AT4G25680.1	21798944
AT4G22220.1	Zm00001d044417_P001	AT5G06410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029638_P001	Maize	cytosol	97.47	97.47
VIT_01s0127g00460.t01	Wine grape	cytosol, endoplasmic reticulum	44.3	68.63
Bra029483.1-P	Field mustard	cytosol, mitochondrion, plastid	55.7	38.26
TraesCS1B01G436500.1	Wheat	mitochondrion	68.35	32.34
TraesCS1D01G414700.1	Wheat	mitochondrion	68.35	32.14
TraesCS1A01G406300.1	Wheat	mitochondrion	67.09	30.81
Solyc03g112900.2.1	Tomato	mitochondrion	64.56	30.72
PGSC0003DMT400046740	Potato	mitochondrion	63.29	30.12
KRH57077	Soybean	mitochondrion	62.03	29.7
KRH03283	Soybean	mitochondrion	60.76	29.09
Os05t0568100-01	Rice	mitochondrion	63.29	29.07
AT3G01020.1	Thale cress	mitochondrion	59.49	28.83
Bra013601.1-P	Field mustard	mitochondrion	55.7	27.67
AT4G22220.1	Thale cress	mitochondrion	58.23	27.54
Bra020855.1-P	Field mustard	mitochondrion	56.96	27.44
KRH54391	Soybean	mitochondrion	59.49	27.33
KRH19966	Soybean	mitochondrion	58.23	26.74
Zm00001d043971_P001	Maize	mitochondrion	60.76	26.67
Solyc07g007450.2.1	Tomato	mitochondrion	53.16	25.61
AT4G04080.1	Thale cress	mitochondrion	54.43	25.15
KXG22553	Sorghum	plastid	69.62	24.66
Zm00001d011514_P001	Maize	mitochondrion	51.9	20.5
PGSC0003DMT400078947	Potato	mitochondrion	51.9	18.64
HORVU3Hr1G059830.7	Barley	mitochondrion	50.63	15.81
CDX94083	Canola	nucleus	48.1	12.97
PGSC0003DMT400035008	Potato	mitochondrion	24.05	12.1
Zm00001d030959_P001	Maize	extracellular, mitochondrion	1.27	0.86

Protein Annotations

Gene3D:3.90.1010.10	MapMan:7.11.2.1.2	UniProt:A0A1D6NF97	GO:GO:0003674	GO:GO:0005488	GO:GO:0005506
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016226
GO:GO:0051536	InterPro:NIF_FeS_clus_asmbl_NifU_N	ProteinID:ONM39150.1	PFAM:PF01592	PANTHER:PTHR10093	PANTHER:PTHR10093:SF8
SUPFAM:SSF82649	UniParc:UPI00084382F0	EnsemblPlantsGene:Zm00001d043816	EnsemblPlants:Zm00001d043816_P001	EnsemblPlants:Zm00001d043816_T001	SEG:seg

Description

Iron-sulfur cluster assembly protein 1

Coordinates

chr3:-:210956682..210957291

Molecular Weight (calculated)

8597.5 Da

IEP (calculated)

8.226

GRAVY (calculated)

-0.218

Length

79 amino acids

Sequence
(BLAST)

1: MLGSLFISAV TASEWVKGKQ VEEVVAIKNT EIAKHLSLPP VKLHCSMLAE DAIKSAVKDY EAKKGKKMAK AEEQDTPCP

Best Arabidopsis Sequence Match ( AT3G01020.1 )
(BLAST)

001: MMMLRQTSRK AYLGLQASPL GLGRRLYHEN VIDHFENPRN VGSFNRNDPN VGTGLVGAPA CGDLMSLQIK VDDSGQIIDT RFKTFGCGSA IASSSVASEW
101: IKGKTLDEVM TIKNAEIAKH LRLPPVKLHC SMLAEDAIKS AVRDYKEKQA KTNAAAAEET VKA

Arabidopsis Description

ISU2Iron-sulfur cluster assembly protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAB6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.