Factsheet for Zm00001d011514_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d016248_P001
Zm00001d044417_P001
Zm00001d045580_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22220.1	Zm00001d016248_P001	AT2G42790.1	21798944
AT4G22220.1	Zm00001d045580_P001	AT4G25680.1	21798944
AT4G22220.1	Zm00001d044417_P001	AT5G06410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043971_P001	Maize	mitochondrion	77.0	85.56
EES03388	Sorghum	mitochondrion	76.0	83.98
Os01t0662600-02	Rice	mitochondrion	65.5	76.61
TraesCS3D01G240900.1	Wheat	mitochondrion	65.5	74.86
TraesCS3B01G268800.1	Wheat	mitochondrion	66.0	74.58
TraesCS3A01G240500.1	Wheat	mitochondrion	65.0	74.29
GSMUA_Achr6P22070_001	Banana	cytosol	37.0	73.27
Solyc03g112900.2.1	Tomato	mitochondrion	58.0	69.88
PGSC0003DMT400046740	Potato	mitochondrion	58.0	69.88
KRH03283	Soybean	mitochondrion	56.5	68.48
KRH57077	Soybean	mitochondrion	56.0	67.88
Zm00001d030959_P001	Maize	extracellular, mitochondrion	38.5	66.38
Bra013601.1-P	Field mustard	mitochondrion	51.5	64.78
Bra020855.1-P	Field mustard	mitochondrion	52.5	64.02
Solyc07g007450.2.1	Tomato	mitochondrion	52.5	64.02
KRH19966	Soybean	mitochondrion	54.5	63.37
AT4G22220.1	Thale cress	mitochondrion	52.5	62.87
KRH54391	Soybean	mitochondrion	54.0	62.79
AT3G01020.1	Thale cress	mitochondrion	50.0	61.35
Bra029483.1-P	Field mustard	cytosol, mitochondrion, plastid	35.0	60.87
AT4G04080.1	Thale cress	mitochondrion	47.0	54.97
Zm00001d029638_P001	Maize	cytosol	21.0	53.16
Zm00001d043816_P001	Maize	cytosol, plastid	20.5	51.9
PGSC0003DMT400078947	Potato	mitochondrion	54.0	49.09
PGSC0003DMT400035008	Potato	mitochondrion	24.0	30.57

Protein Annotations

EntrezGene:100273266	Gene3D:3.90.1010.10	MapMan:7.11.2.1.2	UniProt:A0A1D6G0W5	ProteinID:AQK97098.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016043	GO:GO:0016226	GO:GO:0051536	InterPro:NIF_FeS_clus_asmbl_NifU_N	PFAM:PF01592	PANTHER:PTHR10093
PANTHER:PTHR10093:SF8	SUPFAM:SSF82649	UniParc:UPI000842A528	EnsemblPlantsGene:Zm00001d011514	EnsemblPlants:Zm00001d011514_P001	EnsemblPlants:Zm00001d011514_T001
SEG:seg	:	:	:	:	:

Description

Iron-sulfur cluster assembly protein 1

Coordinates

chr8:-:152940770..152945300

Molecular Weight (calculated)

20842.8 Da

IEP (calculated)

8.132

GRAVY (calculated)

-0.173

Length

200 amino acids

Sequence
(BLAST)

001: MLRAGARQLL APGLRRLGLG TGAAGQVGPA AAAAGMRAYH ERVVDHYNNP RNVGSFDKED PNVGTGLVGA PACGDVMKLQ IRVDEDSGKI VDACFKTFGC
101: GSAIASSSVG MWQAALSATL ASYSSGVHAA GCSAIKYHAD NARELWQCEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYEA KKAKMGQKSE DSPSEKAAEA

Best Arabidopsis Sequence Match ( AT4G22220.1 )
(BLAST)

001: MMLKQAAKKA LGLTSRQSTP WSVGILRTYH ENVIDHYDNP RNVGSFDKND PNVGTGLVGA PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA

Arabidopsis Description

ISU1Iron-sulfur cluster assembly protein [Source:UniProtKB/TrEMBL;Acc:A0A178UZH3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.