Factsheet for GSMUA_Achr6P22070_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr9P25930_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22220.1	GSMUA_Achr10P...	AT2G42790.1	21798944
AT4G22220.1	GSMUA_AchrUn_...	AT4G25680.1	21798944
AT4G22220.1	GSMUA_Achr9P25930_001	AT5G06410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	83.17	80.0
Bra029483.1-P	Field mustard	cytosol, mitochondrion, plastid	67.33	59.13
Solyc03g112900.2.1	Tomato	mitochondrion	83.17	50.6
PGSC0003DMT400046740	Potato	mitochondrion	83.17	50.6
Os01t0662600-02	Rice	mitochondrion	85.15	50.29
TraesCS3D01G240900.1	Wheat	mitochondrion	86.14	49.71
KRH57077	Soybean	mitochondrion	81.19	49.7
GSMUA_Achr6P09070_001	Banana	mitochondrion	83.17	49.41
TraesCS3B01G268800.1	Wheat	mitochondrion	86.14	49.15
TraesCS3A01G240500.1	Wheat	mitochondrion	85.15	49.14
KRH03283	Soybean	mitochondrion	80.2	49.09
Bra013601.1-P	Field mustard	mitochondrion	75.25	47.8
KRH54391	Soybean	mitochondrion	81.19	47.67
AT4G22220.1	Thale cress	mitochondrion	78.22	47.31
Zm00001d043971_P001	Maize	mitochondrion	84.16	47.22
EES03388	Sorghum	mitochondrion	84.16	46.96
Bra020855.1-P	Field mustard	mitochondrion	76.24	46.95
KRH19966	Soybean	mitochondrion	78.22	45.93
Solyc07g007450.2.1	Tomato	mitochondrion	74.26	45.73
AT3G01020.1	Thale cress	mitochondrion	68.32	42.33
AT4G04080.1	Thale cress	mitochondrion	65.35	38.6
Zm00001d011514_P001	Maize	mitochondrion	73.27	37.0
PGSC0003DMT400078947	Potato	mitochondrion	75.25	34.55
Zm00001d030959_P001	Maize	extracellular, mitochondrion	25.74	22.41
PGSC0003DMT400035008	Potato	mitochondrion	33.66	21.66

Protein Annotations

EnsemblPlants:GSMUA_Achr6P22070_001	EnsemblPlants:GSMUA_Achr6T22070_001	EnsemblPlantsGene:GSMUA_Achr6G22070_001	Gene3D:3.90.1010.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005506	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043
GO:GO:0016226	GO:GO:0051536	InterPro:NIF_FeS_clus_asmbl_NifU_N	ncoils:Coil	PANTHER:PTHR10093	PANTHER:PTHR10093:SF8
PFAM:PF01592	SUPFAM:SSF82649	UniParc:UPI0002961FD4	UniProt:M0T955	MapMan:7.11.2.1.2	:

Description

Iron-sulfur cluster assembly enzyme ISCU, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr6G22070_001]

Coordinates

chr6:-:18844139..18849055

Molecular Weight (calculated)

10809.1 Da

IEP (calculated)

8.058

GRAVY (calculated)

-0.230

Length

101 amino acids

Sequence
(BLAST)

001: MKLQIRVDEE SGKIVDACFK TFGCGSAIAS SSVATEWVKG KKMEEVLSIK NTEIAKHLSL PPVKLHCSML AEDAIKAAVK DYEAKKAKEG NADAAAQAEK
101: A

Best Arabidopsis Sequence Match ( AT4G22220.1 )
(BLAST)

001: MMLKQAAKKA LGLTSRQSTP WSVGILRTYH ENVIDHYDNP RNVGSFDKND PNVGTGLVGA PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA

Arabidopsis Description

ISU1Iron-sulfur cluster assembly protein [Source:UniProtKB/TrEMBL;Acc:A0A178UZH3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.