Factsheet for GSMUA_Achr6P09070_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 8
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr9P25930_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22220.1	GSMUA_Achr10P...	AT2G42790.1	21798944
AT4G22220.1	GSMUA_AchrUn_...	AT4G25680.1	21798944
AT4G22220.1	GSMUA_Achr9P25930_001	AT5G06410.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	57.65	93.33
GSMUA_Achr6P22070_001	Banana	cytosol	49.41	83.17
PGSC0003DMT400046740	Potato	mitochondrion	80.0	81.93
Solyc03g112900.2.1	Tomato	mitochondrion	78.82	80.72
KRH57077	Soybean	mitochondrion	77.65	80.0
KRH03283	Soybean	mitochondrion	76.47	78.79
KRH19966	Soybean	mitochondrion	77.06	76.16
Bra013601.1-P	Field mustard	mitochondrion	71.18	76.1
KRH54391	Soybean	mitochondrion	76.47	75.58
Solyc07g007450.2.1	Tomato	mitochondrion	72.35	75.0
Bra020855.1-P	Field mustard	mitochondrion	72.35	75.0
AT4G22220.1	Thale cress	mitochondrion	71.76	73.05
Bra029483.1-P	Field mustard	cytosol, mitochondrion, plastid	47.65	70.43
AT3G01020.1	Thale cress	mitochondrion	64.12	66.87
AT4G04080.1	Thale cress	mitochondrion	66.47	66.08
PGSC0003DMT400078947	Potato	mitochondrion	74.12	57.27
PGSC0003DMT400035008	Potato	mitochondrion	29.41	31.85

Protein Annotations

Gene3D:3.90.1010.10	MapMan:7.11.2.1.2	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005506
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016043	GO:GO:0016226
GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	EnsemblPlantsGene:GSMUA_Achr6G09070_001	EnsemblPlants:GSMUA_Achr6P09070_001	EnsemblPlants:GSMUA_Achr6T09070_001
InterPro:ISC_FeS_clus_asmbl_IscU	UniProt:M0T5F6	InterPro:NIF_FeS_clus_asmbl_NifU_N	PFAM:PF01592	PANTHER:PTHR10093	PANTHER:PTHR10093:SF8
SUPFAM:SSF82649	TIGRFAMs:TIGR01999	UniParc:UPI00029553D0	SEG:seg	:	:

Description

Iron sulfur cluster assembly protein 1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr6G09070_001]

Coordinates

chr6:+:6018976..6023244

Molecular Weight (calculated)

17832.3 Da

IEP (calculated)

8.936

GRAVY (calculated)

-0.194

Length

170 amino acids

Sequence
(BLAST)

001: MLRAAGRRIL GLGSGHRAPA AAVASRGYHE RVVDHYDNPR NVGSFDKNDP TVGTGLVGAP ACGDVMKLQI KVDDATGKIV DACFKTFGCG SAIASSSVAT
101: EWVKGKHMEE VSSIKNTEIA KHLSLPPVKL HCSMLAEDAI KAAVKDYESK KAKLAAANAE TAQTEKVASA

Best Arabidopsis Sequence Match ( AT4G22220.1 )
(BLAST)

001: MMLKQAAKKA LGLTSRQSTP WSVGILRTYH ENVIDHYDNP RNVGSFDKND PNVGTGLVGA PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA

Arabidopsis Description

ISU1Iron-sulfur cluster assembly protein [Source:UniProtKB/TrEMBL;Acc:A0A178UZH3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.