Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... | |
| GSMUA_Achr9P25930_001 | |
| GSMUA_AchrUn_... |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G22220.1 | GSMUA_Achr10P... | AT2G42790.1 | 21798944 |
| AT4G22220.1 | GSMUA_AchrUn_... | AT4G25680.1 | 21798944 |
| AT4G22220.1 | GSMUA_Achr9P25930_001 | AT5G06410.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P22070_001 | Banana | cytosol | 80.0 | 83.17 |
| Bra029483.1-P | Field mustard | cytosol, mitochondrion, plastid | 65.71 | 60.0 |
| GSMUA_Achr6P09070_001 | Banana | mitochondrion | 93.33 | 57.65 |
| PGSC0003DMT400046740 | Potato | mitochondrion | 83.81 | 53.01 |
| Solyc03g112900.2.1 | Tomato | mitochondrion | 82.86 | 52.41 |
| KRH57077 | Soybean | mitochondrion | 80.95 | 51.52 |
| KRH03283 | Soybean | mitochondrion | 80.0 | 50.91 |
| Bra013601.1-P | Field mustard | mitochondrion | 74.29 | 49.06 |
| KRH54391 | Soybean | mitochondrion | 80.0 | 48.84 |
| Bra020855.1-P | Field mustard | mitochondrion | 76.19 | 48.78 |
| KRH19966 | Soybean | mitochondrion | 79.05 | 48.26 |
| AT4G22220.1 | Thale cress | mitochondrion | 74.29 | 46.71 |
| Solyc07g007450.2.1 | Tomato | mitochondrion | 71.43 | 45.73 |
| AT3G01020.1 | Thale cress | mitochondrion | 65.71 | 42.33 |
| AT4G04080.1 | Thale cress | mitochondrion | 66.67 | 40.94 |
| PGSC0003DMT400078947 | Potato | mitochondrion | 73.33 | 35.0 |
| PGSC0003DMT400035008 | Potato | mitochondrion | 32.38 | 21.66 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P20460_001 | EnsemblPlants:GSMUA_Achr10T20460_001 | EnsemblPlantsGene:GSMUA_Achr10G20460_001 | Gene3D:3.90.1010.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0016226 | GO:GO:0051536 | InterPro:NIF_FeS_clus_asmbl_NifU_N | PANTHER:PTHR10093 | PANTHER:PTHR10093:SF8 | PFAM:PF01592 |
| SUPFAM:SSF82649 | UniParc:UPI000294ACE4 | UniProt:M0RJX1 | MapMan:7.11.2.1.2 | : | : |
Description
Iron-sulfur cluster assembly enzyme ISCU, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr10G20460_001]
Coordinates
chr10:-:26431598..26435713
Molecular Weight (calculated)
11192.5 Da
IEP (calculated)
8.071
GRAVY (calculated)
-0.163
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLQIKVDDA TGKIVDACFK TFGCGSAIAS SSVATEWVKG KHMEEVLSIK NTEIAKHLSL PPVKLHCSML AEDAIKAAVK DYEAKKTKLA AGNAETTQTE
101: KVDGA
101: KVDGA
001: MMLKQAAKKA LGLTSRQSTP WSVGILRTYH ENVIDHYDNP RNVGSFDKND PNVGTGLVGA PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA
101: TEWVKGKAME DVLTIKNTEI AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA
Arabidopsis Description
ISU1Iron-sulfur cluster assembly protein [Source:UniProtKB/TrEMBL;Acc:A0A178UZH3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.