Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P12230_001 | Banana | cytosol | 63.71 | 64.23 |
| GSMUA_Achr11P... | Banana | cytosol | 63.31 | 63.56 |
| VIT_16s0050g01050.t01 | Wine grape | cytosol | 60.89 | 62.14 |
| KRH08874 | Soybean | cytosol | 59.27 | 60.0 |
| CDX94426 | Canola | cytosol | 60.89 | 59.92 |
| CDX89402 | Canola | cytosol | 60.48 | 59.76 |
| Bra013910.1-P | Field mustard | cytosol | 60.08 | 59.36 |
| KRH38387 | Soybean | cytosol | 58.87 | 58.87 |
| Bra013908.1-P | Field mustard | cytosol | 56.85 | 57.55 |
| CDX89404 | Canola | cytosol | 56.85 | 57.55 |
| Bra010452.1-P | Field mustard | cytosol | 58.87 | 57.48 |
| CDY66007 | Canola | cytosol | 58.87 | 57.48 |
| CDX94429 | Canola | cytosol | 56.45 | 57.14 |
| CDY49480 | Canola | cytosol | 57.66 | 56.52 |
| AT4G25680.1 | Thale cress | cytosol | 57.26 | 56.35 |
| AT4G25660.1 | Thale cress | cytosol | 56.05 | 54.51 |
| Os06t0107000-01 | Rice | cytosol, nucleus | 57.66 | 52.96 |
| Zm00001d045580_P001 | Maize | cytosol | 56.05 | 51.87 |
| EER87703 | Sorghum | cytosol | 56.05 | 51.87 |
| GSMUA_Achr11P... | Banana | cytosol | 40.73 | 49.51 |
| HORVU7Hr1G002080.2 | Barley | cytosol | 38.31 | 48.22 |
| KRH35244 | Soybean | cytosol, peroxisome, plastid | 45.97 | 47.5 |
| TraesCS7A01G019000.1 | Wheat | cytosol | 55.24 | 46.6 |
| TraesCSU01G065800.1 | Wheat | cytosol | 54.84 | 45.95 |
| TraesCS7D01G016100.1 | Wheat | nucleus | 55.24 | 42.15 |
| GSMUA_Achr5P06500_001 | Banana | cytosol, extracellular, peroxisome | 22.98 | 26.51 |
| GSMUA_Achr4P30040_001 | Banana | mitochondrion | 23.79 | 26.34 |
| GSMUA_Achr7P25980_001 | Banana | mitochondrion | 21.37 | 25.48 |
| GSMUA_Achr2P19400_001 | Banana | plastid | 22.18 | 25.35 |
| GSMUA_AchrUn_... | Banana | cytosol | 21.77 | 25.12 |
| GSMUA_Achr3P04560_001 | Banana | mitochondrion | 22.58 | 24.67 |
| GSMUA_Achr4P14060_001 | Banana | cytosol, plastid, vacuole | 16.13 | 24.24 |
| GSMUA_Achr4P07180_001 | Banana | cytosol, nucleus, peroxisome | 21.77 | 23.48 |
| GSMUA_Achr4P01900_001 | Banana | mitochondrion | 21.37 | 23.45 |
| GSMUA_Achr1P22650_001 | Banana | mitochondrion, nucleus, plasma membrane | 22.18 | 21.32 |
| GSMUA_Achr1P00440_001 | Banana | mitochondrion | 23.39 | 21.17 |
| GSMUA_Achr11P... | Banana | mitochondrion | 23.39 | 18.3 |
| GSMUA_Achr5P12520_001 | Banana | plastid | 23.39 | 15.89 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP10890_001 | EnsemblPlants:GSMUA_AchrUn_randomT10890_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG10890_001 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | PANTHER:PTHR12378 |
| PANTHER:PTHR12378:SF18 | PFAM:PF05903 | SEG:seg | SMART:SM01179 | UniParc:UPI000294AE49 | UniProt:M0U848 |
| MapMan:19.4.1.7 | : | : | : | : | : |
Description
ethylene-responsive element-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG10890_001]
Coordinates
chrchrUn_random:+:52761577..52766530
Molecular Weight (calculated)
27202.3 Da
IEP (calculated)
4.513
GRAVY (calculated)
-0.353
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEVVAHVYD VTNSGSEKAN NTILHINRFF KDGIGVGGIF HSSIQVYGDE EWSFGFCEYG SGVFSCQPCK NPMYTYRESI VLGETTCSIF TVNQILRELS
101: REWRGSSYDL FSRNCNHFCD AFCEMLDVPK LPAWVNRLAN AGDAAMEVAE ITAFKLQQAK AEIINASRVA YKFISGVGSN APTTSEGPSD SGSVAARAQG
201: TWFRNLFSNI GVKPSSSNSS FPEDFDDEEP EDEPSSSSSS SSSSSREK
101: REWRGSSYDL FSRNCNHFCD AFCEMLDVPK LPAWVNRLAN AGDAAMEVAE ITAFKLQQAK AEIINASRVA YKFISGVGSN APTTSEGPSD SGSVAARAQG
201: TWFRNLFSNI GVKPSSSNSS FPEDFDDEEP EDEPSSSSSS SSSSSREK
001: MTEVVLHIYD VTNSGSEKTN NTIVQINRFF KDGIGLGGIF HSAIQVYGND EWSYGYCELG TGVFSCPSGK NPMYTYREKI VLGKTDCTIF MVNQMLRELS
101: REWPGHTYDL LSKNCNHFCD VLCDRLGVPK IPGWVNRFAN AGDTALEVAG NTAMRMKQAK TELVSASKVA YRFLSNVTSN VTNGSNGSPQ RPGTLNNSDS
201: GNLRLQGSWL KGLLNTAKPS TSTEIGNKDE DANHAVTNQK KQSRDSDVLL FQ
101: REWPGHTYDL LSKNCNHFCD VLCDRLGVPK IPGWVNRFAN AGDTALEVAG NTAMRMKQAK TELVSASKVA YRFLSNVTSN VTNGSNGSPQ RPGTLNNSDS
201: GNLRLQGSWL KGLLNTAKPS TSTEIGNKDE DANHAVTNQK KQSRDSDVLL FQ
Arabidopsis Description
At4g25680 [Source:UniProtKB/TrEMBL;Acc:Q9SZZ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.