Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P25980_001 | Banana | mitochondrion | 76.96 | 85.1 |
| GSMUA_Achr4P14060_001 | Banana | cytosol, plastid, vacuole | 51.3 | 71.52 |
| VIT_18s0001g12090.t01 | Wine grape | mitochondrion | 71.3 | 66.4 |
| GSMUA_Achr1P22650_001 | Banana | mitochondrion, nucleus, plasma membrane | 71.3 | 63.57 |
| Os03t0198500-01 | Rice | mitochondrion | 68.26 | 63.56 |
| KRG89196 | Soybean | mitochondrion | 69.13 | 63.35 |
| KRH05795 | Soybean | mitochondrion | 69.13 | 63.35 |
| Zm00001d048173_P001 | Maize | mitochondrion | 69.57 | 63.24 |
| Zm00001d028130_P001 | Maize | mitochondrion | 68.7 | 63.2 |
| EER95329 | Sorghum | mitochondrion | 69.13 | 63.1 |
| KRH15239 | Soybean | mitochondrion | 68.7 | 62.95 |
| KRH49521 | Soybean | mitochondrion | 68.26 | 62.55 |
| PGSC0003DMT400064873 | Potato | nucleus | 66.09 | 61.04 |
| Solyc01g109430.2.1 | Tomato | cytosol, mitochondrion, nucleus | 66.09 | 61.04 |
| TraesCS4B01G261700.1 | Wheat | mitochondrion | 65.65 | 60.89 |
| TraesCS4A01G040500.1 | Wheat | mitochondrion | 65.65 | 60.89 |
| Solyc12g089060.1.1 | Tomato | mitochondrion | 65.22 | 60.73 |
| PGSC0003DMT400039949 | Potato | mitochondrion | 65.22 | 60.73 |
| TraesCS4D01G261500.1 | Wheat | mitochondrion | 65.22 | 60.48 |
| KRH38144 | Soybean | mitochondrion | 55.65 | 59.53 |
| CDY10616 | Canola | cytosol, nucleus, peroxisome | 64.35 | 58.96 |
| Solyc04g080030.2.1 | Tomato | mitochondrion | 60.43 | 57.2 |
| AT1G47740.3 | Thale cress | nucleus | 65.65 | 54.12 |
| CDY25677 | Canola | nucleus | 63.04 | 53.9 |
| Bra032229.1-P | Field mustard | nucleus | 64.35 | 53.05 |
| CDY23657 | Canola | nucleus | 64.35 | 52.86 |
| Bra014091.1-P | Field mustard | nucleus | 64.35 | 52.67 |
| CDY17812 | Canola | nucleus | 64.35 | 52.67 |
| CDY17002 | Canola | nucleus | 63.91 | 52.31 |
| PGSC0003DMT400071605 | Potato | mitochondrion | 63.04 | 50.88 |
| GSMUA_Achr4P01900_001 | Banana | mitochondrion | 46.52 | 47.35 |
| VIT_03s0063g02130.t01 | Wine grape | mitochondrion | 67.83 | 46.57 |
| HORVU4Hr1G070620.3 | Barley | cytosol, nucleus, plastid | 66.52 | 46.36 |
| GSMUA_Achr3P04560_001 | Banana | mitochondrion | 45.22 | 45.81 |
| GSMUA_Achr4P30040_001 | Banana | mitochondrion | 43.48 | 44.64 |
| GSMUA_AchrUn_... | Banana | cytosol | 41.3 | 44.19 |
| GSMUA_Achr5P06500_001 | Banana | cytosol, extracellular, peroxisome | 40.0 | 42.79 |
| GSMUA_Achr2P19400_001 | Banana | plastid | 40.0 | 42.4 |
| GSMUA_Achr1P00440_001 | Banana | mitochondrion | 41.3 | 34.67 |
| GSMUA_Achr11P... | Banana | mitochondrion | 45.65 | 33.12 |
| GSMUA_Achr5P12520_001 | Banana | plastid | 41.74 | 26.3 |
| GSMUA_Achr8P12230_001 | Banana | cytosol | 23.91 | 22.36 |
| GSMUA_Achr11P... | Banana | cytosol | 19.57 | 22.06 |
| GSMUA_Achr11P... | Banana | cytosol | 23.48 | 21.86 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.48 | 21.77 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P07180_001 | EnsemblPlants:GSMUA_Achr4T07180_001 | EnsemblPlantsGene:GSMUA_Achr4G07180_001 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | PANTHER:PTHR12378 |
| PANTHER:PTHR12378:SF11 | PFAM:PF05903 | SMART:SM01179 | UniParc:UPI000294FFC5 | UniProt:M0SLT5 | MapMan:19.4.1.7 |
Description
ethylene-responsive element-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G07180_001]
Coordinates
chr4:-:5344090..5354144
Molecular Weight (calculated)
26020.2 Da
IEP (calculated)
8.630
GRAVY (calculated)
-0.314
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPKVRSASQ TSGNAPVYLN VYDLTPINGY MYWAGLGIYH TGVEVHGVEY AFGAHDYPSS GVFEVEPRQC PGFRFRKSIF MGTTCLDPLQ LREFMELQSV
101: NYNGDTYHLI MKNCNHFCKD ICYKLTGNSI PKWVNRLARI GSLCNCLLPE ALKITAVQHG PDSPSEDGEK RRLRSAFGCL SSISMRQRQF SASSLLLTSP
201: FRGSLSHWDF RRTGCLQHHP SDTLRLLQQP
101: NYNGDTYHLI MKNCNHFCKD ICYKLTGNSI PKWVNRLARI GSLCNCLLPE ALKITAVQHG PDSPSEDGEK RRLRSAFGCL SSISMRQRQF SASSLLLTSP
201: FRGSLSHWDF RRTGCLQHHP SDTLRLLQQP
001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
Arabidopsis Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.