CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49521	Soybean	mitochondrion	97.21	97.21
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	75.3	75.9
PGSC0003DMT400064873	Potato	nucleus	74.9	75.5
GSMUA_Achr7P25980_001	Banana	mitochondrion	61.35	74.04
KRH05795	Soybean	mitochondrion	72.11	72.11
KRH15239	Soybean	mitochondrion	71.71	71.71
KRH38144	Soybean	mitochondrion	60.16	70.23
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	63.35	69.13
Zm00001d028130_P001	Maize	mitochondrion	66.14	66.4
CDY10616	Canola	cytosol, nucleus, peroxisome	65.34	65.34
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	66.93	65.12
EER95329	Sorghum	mitochondrion	65.34	65.08
KXG39054	Sorghum	plastid	64.14	64.92
TraesCS4A01G040500.1	Wheat	mitochondrion	63.74	64.52
Zm00001d048173_P001	Maize	mitochondrion	64.94	64.43
Os03t0198500-01	Rice	mitochondrion	63.35	64.37
TraesCS4D01G261500.1	Wheat	mitochondrion	63.35	64.11
TraesCS4B01G261700.1	Wheat	mitochondrion	63.35	64.11
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	41.04	62.42
AT1G47740.3	Thale cress	nucleus	66.93	60.22
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	61.75	59.62
VIT_03s0063g02130.t01	Wine grape	mitochondrion	78.88	59.1
CDY17002	Canola	nucleus	66.14	59.07
Bra032229.1-P	Field mustard	nucleus	65.34	58.78
CDY25677	Canola	nucleus	62.95	58.74
Bra014091.1-P	Field mustard	nucleus	65.74	58.72
CDY23657	Canola	nucleus	65.34	58.57
CDY17812	Canola	nucleus	65.34	58.36
KRH05264	Soybean	cytosol, mitochondrion	44.22	51.39
KRH15787	Soybean	mitochondrion	43.82	51.16
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	64.54	49.09
KRH52364	Soybean	mitochondrion	41.83	46.88
KRH61696	Soybean	cytosol	40.24	46.54
KRH03735	Soybean	nucleus	40.24	44.89
KRH63012	Soybean	nucleus	40.64	44.35
KRH44526	Soybean	mitochondrion	37.85	43.78
KRH28159	Soybean	cytosol	39.04	43.75
KRH77327	Soybean	cytosol	39.04	43.75
KRH57475	Soybean	cytosol	38.25	43.05
KRH47381	Soybean	cytosol	37.45	42.92
KRH04183	Soybean	cytosol	37.85	42.6
KRH54877	Soybean	cytosol, peroxisome	31.47	41.8
KRH35244	Soybean	cytosol, peroxisome, plastid	23.9	25.0
KRH08874	Soybean	cytosol	21.51	22.04
KRH38387	Soybean	cytosol	21.51	21.77

Protein Annotations

EMBL:ACUP02012191	EMBL:BT094364	EnsemblPlants:KRG89196	EnsemblPlantsGene:GLYMA_20G007800	EntrezGene:100777596	Gene3D:3.90.1720.30
InterPro:PPPDE_dom	MEROPS:C97.A09	PANTHER:PTHR12378	PANTHER:PTHR12378:SF4	PFAM:PF05903	ProteinID:KRG89196
ProteinID:KRG89196.1	SEG:seg	SMART:SM01179	UniParc:UPI0001B15F28	UniProt:C6TA34	MapMan:19.4.1.7

Description

hypothetical protein

Coordinates

chr20:+:717053..721984

Molecular Weight (calculated)

28484.3 Da

IEP (calculated)

9.082

GRAVY (calculated)

-0.375

Length

251 amino acids

Sequence
(BLAST)

001: MKSGLKNGWP SVVRLRLRDK SVTPFCIFSK VKSAGNIPGN TPVYLNVYDL TTVNGYMYWA GIGIFHSGVE VYGVEYAFGA HDYPTSGVFE VEPRQCPGFK
101: FRKSIFMGTT NLDPFQIREF MERQSANYNG DTYHLIVKNC NHFCEDICYK LTGNSIPKWV NRLARIGSLC NCILPDALKT STVQHDDPNF QGCDSEKRRL
201: RTAFSCLSSI SMPQKEVSMS SLFMHSHYKG CLPPWELKKS KKGTLKQKLE D

Best Arabidopsis Sequence Match ( AT1G47740.1 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.