CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44526	Soybean	mitochondrion	89.95	90.78
PGSC0003DMT400036630	Potato	cytosol	68.95	67.71
VIT_09s0002g08960.t01	Wine grape	plasma membrane	70.78	67.69
Solyc03g117100.2.1	Tomato	cytosol	69.41	67.56
Bra035161.1-P	Field mustard	cytosol	67.12	64.47
CDY39951	Canola	cytosol	67.12	64.47
AT1G80690.2	Thale cress	cytosol	67.12	63.64
Bra003580.1-P	Field mustard	cytosol	66.21	63.6
CDX67961	Canola	cytosol	66.21	63.6
CDX87334	Canola	cytosol	67.12	63.36
CDX79359	Canola	cytosol	65.3	62.72
KRH15787	Soybean	mitochondrion	57.99	59.07
KRH05264	Soybean	cytosol, mitochondrion	57.53	58.33
KRH61696	Soybean	cytosol	56.16	56.68
KRH52364	Soybean	mitochondrion	57.08	55.8
GSMUA_Achr4P01900_001	Banana	mitochondrion	57.08	55.31
Solyc06g068380.2.1	Tomato	cytosol	64.38	53.41
GSMUA_Achr3P04560_001	Banana	mitochondrion	53.42	51.54
PGSC0003DMT400073331	Potato	nucleus	65.75	45.57
KRH38144	Soybean	mitochondrion	42.47	43.26
GSMUA_Achr11P...	Banana	mitochondrion	57.99	40.06
KRH57475	Soybean	cytosol	40.64	39.91
KRH15239	Soybean	mitochondrion	45.66	39.84
KRH05795	Soybean	mitochondrion	45.66	39.84
KRH28159	Soybean	cytosol	40.18	39.29
KRH04183	Soybean	cytosol	39.73	39.01
HORVU7Hr1G029950.1	Barley	plastid	43.38	38.62
KRH77327	Soybean	cytosol	39.27	38.39
Zm00001d045118_P001	Maize	plastid	42.01	38.02
TraesCS7D01G147600.1	Wheat	plastid	44.29	37.89
Os06t0182100-00	Rice	plastid	45.21	37.79
KRG89196	Soybean	mitochondrion	42.92	37.45
KRH49521	Soybean	mitochondrion	42.92	37.45
KXG19474	Sorghum	plastid	44.75	37.4
TraesCS7A01G146100.1	Wheat	plastid	43.38	37.4
TraesCS7B01G048600.1	Wheat	plastid	42.92	36.29
KRH03735	Soybean	nucleus	36.99	36.0
KRH63012	Soybean	nucleus	36.53	34.78
KRH54877	Soybean	cytosol, peroxisome	27.4	31.75
KRH35244	Soybean	cytosol, peroxisome, plastid	26.94	24.58
KRH08874	Soybean	cytosol	27.4	24.49
KRH38387	Soybean	cytosol	26.48	23.39

Protein Annotations

EMBL:ACUP02004147	EnsemblPlants:KRH47381	EnsemblPlantsGene:GLYMA_07G025600	EntrezGene:100817929	Gene3D:3.90.1720.30	InterPro:PPPDE_dom
MEROPS:C97.A04	PANTHER:PTHR12378	PANTHER:PTHR12378:SF17	PFAM:PF05903	ProteinID:KRH47381	ProteinID:KRH47381.1
SEG:seg	SMART:SM01179	UniParc:UPI0000E64A84	UniProt:I1KGV8	MapMan:19.4.1.7	:

Description

hypothetical protein

Coordinates

chr7:+:1999918..2002329

Molecular Weight (calculated)

24083.0 Da

IEP (calculated)

9.892

GRAVY (calculated)

-0.371

Length

219 amino acids

Sequence
(BLAST)

001: MLCRKSSKND VGSGSVPVHL NVYDLTPING YAYWFGLGVY HSGVQVHGVE FAFGAHEYSL TGIFEGEPKR CEGFAFRKTI LIGKTDMRPG EVKAVMEELA
101: AKYRGNAYNL ITKNCNHFCN DACLRLTGNP IPSWVNRLAR IGFMCNCVLP VTLNSTKVRH HKMEEKQCEG EKQALATKAK KLSASNSSSS SPEGLRRGRS
201: RNRRALPPSS PLIIGSSSS

Best Arabidopsis Sequence Match ( AT1G80690.1 )
(BLAST)

001: MLCRKNSSLV DRGNVPVYLN VYDLTPINGY AYWLGLGVYH SGVEVHGIEY AYGAHEYPST GIFEGEPKQC EGFTFRKSIL IGKTDLGPLE VRATMEQLAD
101: NYKGSSYNLI TKNCNHFCDE TCIKLTGNPI PSWVNRLARI GFMCNCVLPA TINATRFGNN RVNQDKSCEA ENEKKKLTSV SSRERSTIAT PSSSSSSPSV
201: QVRGRSRKRR PRALQPSSPL TLGSSSV

Arabidopsis Description

F23A5.4 protein [Source:UniProtKB/TrEMBL;Acc:Q9SAI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.