Factsheet for Bra035161.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 3
plastid 1
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87334	Canola	cytosol	100.0	98.28
AT1G80690.2	Thale cress	cytosol	90.35	89.18
Bra003580.1-P	Field mustard	cytosol	86.4	86.4
KRH44526	Soybean	mitochondrion	66.23	69.59
KRH47381	Soybean	cytosol	64.47	67.12
VIT_09s0002g08960.t01	Wine grape	plasma membrane	65.79	65.5
PGSC0003DMT400036630	Potato	cytosol	62.72	64.13
Solyc03g117100.2.1	Tomato	cytosol	62.72	63.56
Bra009823.1-P	Field mustard	cytosol, mitochondrion	57.02	59.09
Bra020487.1-P	Field mustard	mitochondrion	54.82	57.87
GSMUA_Achr4P01900_001	Banana	mitochondrion	51.75	52.21
GSMUA_Achr3P04560_001	Banana	mitochondrion	50.44	50.66
Solyc06g068380.2.1	Tomato	cytosol	56.58	48.86
Bra011312.1-P	Field mustard	nucleus	48.68	48.26
Bra032034.1-P	Field mustard	nucleus, plasma membrane	52.63	48.19
Bra012661.1-P	Field mustard	cytosol	39.04	41.59
PGSC0003DMT400073331	Potato	nucleus	56.58	40.82
GSMUA_Achr11P...	Banana	mitochondrion	55.7	40.06
Bra024951.1-P	Field mustard	cytosol	39.91	37.45
Bra032229.1-P	Field mustard	nucleus	44.3	36.2
Bra014091.1-P	Field mustard	nucleus	44.3	35.94
HORVU7Hr1G029950.1	Barley	plastid	38.6	35.77
Zm00001d045118_P001	Maize	plastid	37.72	35.54
KXG19474	Sorghum	plastid	40.35	35.11
TraesCS7D01G147600.1	Wheat	plastid	38.6	34.38
TraesCS7A01G146100.1	Wheat	plastid	38.16	34.25
TraesCS7B01G048600.1	Wheat	plastid	38.6	33.98
Os06t0182100-00	Rice	plastid	39.04	33.97
Bra013908.1-P	Field mustard	cytosol	26.32	24.49
Bra010452.1-P	Field mustard	cytosol	26.75	24.02
Bra013910.1-P	Field mustard	cytosol	26.32	23.9
Bra007813.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	51.75	21.53

Protein Annotations

EnsemblPlants:Bra035161.1	EnsemblPlants:Bra035161.1-P	EnsemblPlantsGene:Bra035161	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	MEROPS:C97.A04
ncoils:Coil	PANTHER:PTHR12378	PANTHER:PTHR12378:SF17	PFAM:PF05903	SEG:seg	SMART:SM01179
UniParc:UPI0002541E29	UniProt:M4F264	MapMan:19.4.1.7	:	:	:

Description

AT1G80690 (E=3e-113) | unknown protein

Coordinates

chrA07:+:22410752..22411959

Molecular Weight (calculated)

25109.9 Da

IEP (calculated)

8.713

GRAVY (calculated)

-0.393

Length

228 amino acids

Sequence
(BLAST)

001: MLCRKNSSVV DRGNVPVYLN VYDLTPINGY AYWFGLGVYH SGVEVHGIEY AYGAHEYPST GIFEGEPKQC EGFTFRKSIL IGKTDLGPLE VRATMEELSE
101: IYKGSSYNLI TKNCNHFCDE ICIKLTGNPI PSWVNRLARI GFMCNCVLPA TINATKLGNN RINQDKSCEA ETEKKKLTGG SSRESSTTID TPSSSSSSPS
201: VQVRGRSRKR RPRAMHPSSP VILGSSTV

Best Arabidopsis Sequence Match ( AT1G80690.1 )
(BLAST)

001: MLCRKNSSLV DRGNVPVYLN VYDLTPINGY AYWLGLGVYH SGVEVHGIEY AYGAHEYPST GIFEGEPKQC EGFTFRKSIL IGKTDLGPLE VRATMEQLAD
101: NYKGSSYNLI TKNCNHFCDE TCIKLTGNPI PSWVNRLARI GFMCNCVLPA TINATRFGNN RVNQDKSCEA ENEKKKLTSV SSRERSTIAT PSSSSSSPSV
201: QVRGRSRKRR PRALQPSSPL TLGSSSV

Arabidopsis Description

F23A5.4 protein [Source:UniProtKB/TrEMBL;Acc:Q9SAI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.