Factsheet for Bra032034.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35370	Canola	nucleus, plasma membrane	97.99	99.19
CDY62507	Canola	nucleus, plasma membrane	95.18	98.34
AT2G25190.1	Thale cress	nucleus, vacuole	81.12	84.17
VIT_04s0008g05960.t01	Wine grape	mitochondrion	58.23	64.16
KRH05264	Soybean	cytosol, mitochondrion	54.62	62.96
KRH15787	Soybean	mitochondrion	53.41	61.86
Bra009823.1-P	Field mustard	cytosol, mitochondrion	54.22	61.36
Bra020487.1-P	Field mustard	mitochondrion	53.01	61.11
Bra011312.1-P	Field mustard	nucleus	55.82	60.43
KRH61696	Soybean	cytosol	51.41	58.99
KRH52364	Soybean	mitochondrion	52.21	58.04
Bra035161.1-P	Field mustard	cytosol	48.19	52.63
Bra003580.1-P	Field mustard	cytosol	46.99	51.32
Bra012661.1-P	Field mustard	cytosol	38.15	44.39
Bra024951.1-P	Field mustard	cytosol	37.35	38.27
Bra007813.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	81.12	36.86
Bra032229.1-P	Field mustard	nucleus	39.36	35.13
Bra014091.1-P	Field mustard	nucleus	39.36	34.88
Bra013908.1-P	Field mustard	cytosol	22.89	23.27
Bra010452.1-P	Field mustard	cytosol	23.29	22.83
Bra013910.1-P	Field mustard	cytosol	22.09	21.91

Protein Annotations

EnsemblPlants:Bra032034.1	EnsemblPlants:Bra032034.1-P	EnsemblPlantsGene:Bra032034	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	MEROPS:C97.A08
PANTHER:PTHR12378	PANTHER:PTHR12378:SF12	PFAM:PF05903	SEG:seg	SMART:SM01179	UniParc:UPI0002544EEF
UniProt:M4ETA4	MapMan:19.4.1.7	:	:	:	:

Description

AT2G25190 (E=9e-085) | unknown protein

Coordinates

chrA04:+:11356230..11357233

Molecular Weight (calculated)

27637.2 Da

IEP (calculated)

10.514

GRAVY (calculated)

-0.601

Length

249 amino acids

Sequence
(BLAST)

001: MLCWKGSSVR RKEKTGLLPV YLNVYDLTPM NAYGYWLGLG VFHSGVEVHG VEYAFGAHEA PSTGIFEVEP KKCPGFTFRK SILVGKTDMA AKEVRVFMEK
101: LAEEYRGNKY NLISRNCNHF CNEVCVKLTQ KPIPRWVNRL ARLGVLCNCV LPPRFNETKV RRVVKGELSE EERKKRRNRS RSGPLLSTSS SSSTPDSHGS
201: HIRAKSTGNN PTSSTSSSTS GSKKSKKQCA PPTAPRAPDQ KSPSVSVKT

Best Arabidopsis Sequence Match ( AT2G25190.1 )
(BLAST)

001: MLCFKGSVKR KKQSGSVPVY LNVYDLTPMN AYGYWLGLGV FHSGVEVHGV EYAFGAHESS STGIFEVEPK KCPGFTFRKS ILVGKTDLVA KEVRVFMEKL
101: AEEYQGNKYH LITRNCNHFC NEVCLKLAQK SIPRWVNRLA RLGVLCNCVL PPRLNEAKVR RVGKGELSES EKKKLRNRSR SDPLLSSSPS SSTPDNHRSH
201: IRAKSSGNHP SSSSSSSSGS KKNRRPKAQD QKSPSVSIKT

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O81728]
SUBAcon: [vacuole,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.