Factsheet for Bra003580.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67961	Canola	cytosol	100.0	100.0
AT1G80690.2	Thale cress	cytosol	87.72	86.58
Bra035161.1-P	Field mustard	cytosol	86.4	86.4
KRH44526	Soybean	mitochondrion	64.91	68.2
KRH47381	Soybean	cytosol	63.6	66.21
VIT_09s0002g08960.t01	Wine grape	plasma membrane	66.23	65.94
PGSC0003DMT400036630	Potato	cytosol	60.96	62.33
Solyc03g117100.2.1	Tomato	cytosol	60.96	61.78
Bra009823.1-P	Field mustard	cytosol, mitochondrion	57.46	59.55
Bra020487.1-P	Field mustard	mitochondrion	55.26	58.33
GSMUA_Achr4P01900_001	Banana	mitochondrion	50.44	50.88
Solyc06g068380.2.1	Tomato	cytosol	57.89	50.0
GSMUA_Achr3P04560_001	Banana	mitochondrion	49.56	49.78
Bra011312.1-P	Field mustard	nucleus	47.81	47.39
Bra032034.1-P	Field mustard	nucleus, plasma membrane	51.32	46.99
PGSC0003DMT400073331	Potato	nucleus	58.33	42.09
Bra012661.1-P	Field mustard	cytosol	38.16	40.65
GSMUA_Achr11P...	Banana	mitochondrion	54.39	39.12
HORVU7Hr1G029950.1	Barley	plastid	39.04	36.18
Bra032229.1-P	Field mustard	nucleus	43.86	35.84
Bra024951.1-P	Field mustard	cytosol	38.16	35.8
Bra014091.1-P	Field mustard	nucleus	43.86	35.59
KXG19474	Sorghum	plastid	40.79	35.5
Zm00001d045118_P001	Maize	plastid	37.28	35.12
TraesCS7D01G147600.1	Wheat	plastid	39.04	34.77
TraesCS7A01G146100.1	Wheat	plastid	38.6	34.65
TraesCS7B01G048600.1	Wheat	plastid	39.04	34.36
Os06t0182100-00	Rice	plastid	39.04	33.97
Bra013908.1-P	Field mustard	cytosol	25.0	23.27
Bra010452.1-P	Field mustard	cytosol	25.44	22.83
Bra013910.1-P	Field mustard	cytosol	24.12	21.91
Bra007813.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	49.56	20.62

Protein Annotations

EnsemblPlants:Bra003580.1	EnsemblPlants:Bra003580.1-P	EnsemblPlantsGene:Bra003580	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	MEROPS:C97.A04
PANTHER:PTHR12378	PANTHER:PTHR12378:SF17	PFAM:PF05903	SEG:seg	SMART:SM01179	UniParc:UPI000254130B
UniProt:M4CH97	MapMan:19.4.1.7	:	:	:	:

Description

AT1G80690 (E=1e-097) | unknown protein

Coordinates

chrA07:-:13899212..13900489

Molecular Weight (calculated)

25271.0 Da

IEP (calculated)

9.240

GRAVY (calculated)

-0.467

Length

228 amino acids

Sequence
(BLAST)

001: MLCRKNSSVV DRGNVPVYLN VYDLTPINGY AYWFGLGVYH SGVEVHGIEY AFGAHEYPST GIFEGEPKQC EGFTFRKSIL IGKTDLGPLE VRATMDQLAD
101: KYKGSSYNLI TNNCNHFCDD TCMKLTGNPI PSWVNRLARI GFICNCVLPA TINATKLADN RVNQDKTCEA EANTKKLTSV SRRERSTTDT PSPSSSSPSV
201: QVRGRSRKRR PRRAMQPSST LILSSSTT

Best Arabidopsis Sequence Match ( AT1G80690.1 )
(BLAST)

001: MLCRKNSSLV DRGNVPVYLN VYDLTPINGY AYWLGLGVYH SGVEVHGIEY AYGAHEYPST GIFEGEPKQC EGFTFRKSIL IGKTDLGPLE VRATMEQLAD
101: NYKGSSYNLI TKNCNHFCDE TCIKLTGNPI PSWVNRLARI GFMCNCVLPA TINATRFGNN RVNQDKSCEA ENEKKKLTSV SSRERSTIAT PSSSSSSPSV
201: QVRGRSRKRR PRALQPSSPL TLGSSSV

Arabidopsis Description

F23A5.4 protein [Source:UniProtKB/TrEMBL;Acc:Q9SAI9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.