Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003580.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX79359 | Canola | cytosol | 97.37 | 97.37 |
| AT1G80690.2 | Thale cress | cytosol | 87.72 | 86.58 |
| CDY39951 | Canola | cytosol | 86.4 | 86.4 |
| CDX87334 | Canola | cytosol | 86.4 | 84.91 |
| KRH44526 | Soybean | mitochondrion | 64.91 | 68.2 |
| KRH47381 | Soybean | cytosol | 63.6 | 66.21 |
| VIT_09s0002g08960.t01 | Wine grape | plasma membrane | 66.23 | 65.94 |
| PGSC0003DMT400036630 | Potato | cytosol | 60.96 | 62.33 |
| Solyc03g117100.2.1 | Tomato | cytosol | 60.96 | 61.78 |
| CDY07077 | Canola | cytosol, mitochondrion | 57.46 | 59.55 |
| CDX88162 | Canola | cytosol, mitochondrion | 57.02 | 59.09 |
| CDY65538 | Canola | cytosol, mitochondrion | 57.02 | 59.09 |
| CDY65539 | Canola | cytosol, mitochondrion | 57.02 | 59.09 |
| CDY05475 | Canola | mitochondrion | 55.26 | 58.33 |
| CDY05376 | Canola | cytosol, mitochondrion | 54.39 | 57.41 |
| GSMUA_Achr4P01900_001 | Banana | mitochondrion | 50.44 | 50.88 |
| Solyc06g068380.2.1 | Tomato | cytosol | 57.89 | 50.0 |
| GSMUA_Achr3P04560_001 | Banana | mitochondrion | 49.56 | 49.78 |
| CDX76766 | Canola | nucleus | 50.44 | 48.73 |
| CDY62507 | Canola | nucleus, plasma membrane | 50.44 | 47.72 |
| CDY35370 | Canola | nucleus, plasma membrane | 51.32 | 47.56 |
| CDX75209 | Canola | nucleus | 47.81 | 47.39 |
| PGSC0003DMT400073331 | Potato | nucleus | 58.33 | 42.09 |
| CDX90471 | Canola | cytosol | 38.6 | 41.12 |
| CDY10616 | Canola | cytosol, nucleus, peroxisome | 43.86 | 39.84 |
| CDY09624 | Canola | cytosol | 37.28 | 39.53 |
| GSMUA_Achr11P... | Banana | mitochondrion | 54.39 | 39.12 |
| CDY27921 | Canola | cytosol | 36.84 | 37.84 |
| CDX76571 | Canola | cytosol | 37.28 | 37.61 |
| CDY25677 | Canola | nucleus | 43.86 | 37.17 |
| CDX68806 | Canola | nucleus | 50.44 | 37.1 |
| CDX77757 | Canola | cytosol | 38.6 | 36.21 |
| HORVU7Hr1G029950.1 | Barley | plastid | 39.04 | 36.18 |
| CDY64684 | Canola | cytosol | 38.16 | 35.8 |
| CDY23657 | Canola | nucleus | 43.86 | 35.71 |
| CDY17002 | Canola | nucleus | 43.86 | 35.59 |
| KXG19474 | Sorghum | plastid | 40.79 | 35.5 |
| CDY17812 | Canola | nucleus | 43.42 | 35.23 |
| Zm00001d045118_P001 | Maize | plastid | 37.28 | 35.12 |
| TraesCS7D01G147600.1 | Wheat | plastid | 39.04 | 34.77 |
| TraesCS7A01G146100.1 | Wheat | plastid | 38.6 | 34.65 |
| TraesCS7B01G048600.1 | Wheat | plastid | 39.04 | 34.36 |
| Os06t0182100-00 | Rice | plastid | 39.04 | 33.97 |
| CDX94429 | Canola | cytosol | 25.44 | 23.67 |
| CDY49480 | Canola | cytosol | 25.88 | 23.32 |
| CDX89404 | Canola | cytosol | 25.0 | 23.27 |
| CDY66007 | Canola | cytosol | 25.44 | 22.83 |
| CDX94426 | Canola | cytosol | 24.56 | 22.22 |
| CDX89402 | Canola | cytosol | 24.12 | 21.91 |
| CDY56277 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole | 50.0 | 20.8 |
Protein Annotations
| EnsemblPlants:CDX67961 | EnsemblPlantsGene:GSBRNA2T00099173001 | Gene3D:3.90.1720.30 | InterPro:PPPDE_dom | KEGG:00261+3.4.-.- | KEGG:00310+3.4.-.- |
| KEGG:00550+3.4.-.- | KEGG:00780+3.4.-.- | MEROPS:C97.A04 | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF17 | PFAM:PF05903 |
| ProteinID:CDX67961 | ProteinID:CDX67961.1 | SEG:seg | SMART:SM01179 | UniParc:UPI000254130B | MapMan:19.4.1.7 |
Description
BnaA07g20010D
Coordinates
chrLK031787:-:3115826..3117326
Molecular Weight (calculated)
25271.0 Da
IEP (calculated)
9.240
GRAVY (calculated)
-0.467
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MLCRKNSSVV DRGNVPVYLN VYDLTPINGY AYWFGLGVYH SGVEVHGIEY AFGAHEYPST GIFEGEPKQC EGFTFRKSIL IGKTDLGPLE VRATMDQLAD
101: KYKGSSYNLI TNNCNHFCDD TCMKLTGNPI PSWVNRLARI GFICNCVLPA TINATKLADN RVNQDKTCEA EANTKKLTSV SRRERSTTDT PSPSSSSPSV
201: QVRGRSRKRR PRRAMQPSST LILSSSTT
101: KYKGSSYNLI TNNCNHFCDD TCMKLTGNPI PSWVNRLARI GFICNCVLPA TINATKLADN RVNQDKTCEA EANTKKLTSV SRRERSTTDT PSPSSSSPSV
201: QVRGRSRKRR PRRAMQPSST LILSSSTT
001: MLCRKNSSLV DRGNVPVYLN VYDLTPINGY AYWLGLGVYH SGVEVHGIEY AYGAHEYPST GIFEGEPKQC EGFTFRKSIL IGKTDLGPLE VRATMEQLAD
101: NYKGSSYNLI TKNCNHFCDE TCIKLTGNPI PSWVNRLARI GFMCNCVLPA TINATRFGNN RVNQDKSCEA ENEKKKLTSV SSRERSTIAT PSSSSSSPSV
201: QVRGRSRKRR PRALQPSSPL TLGSSSV
101: NYKGSSYNLI TKNCNHFCDE TCIKLTGNPI PSWVNRLARI GFMCNCVLPA TINATRFGNN RVNQDKSCEA ENEKKKLTSV SSRERSTIAT PSSSSSSPSV
201: QVRGRSRKRR PRALQPSSPL TLGSSSV
Arabidopsis Description
F23A5.4 protein [Source:UniProtKB/TrEMBL;Acc:Q9SAI9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.