CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 2
mitochondrion 3
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus, peroxisome, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007813.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	99.82	99.82
CDX76766	Canola	nucleus	40.33	93.64
CDY35370	Canola	nucleus, plasma membrane	37.04	82.52
CDY62507	Canola	nucleus, plasma membrane	36.13	82.16
AT2G25190.1	Thale cress	nucleus, vacuole	35.58	81.25
KRH05264	Soybean	cytosol, mitochondrion	25.0	63.43
KRH15787	Soybean	mitochondrion	24.64	62.79
VIT_04s0008g05960.t01	Wine grape	mitochondrion	25.73	62.39
CDY07077	Canola	cytosol, mitochondrion	23.72	59.09
KRH61696	Soybean	cytosol	23.36	58.99
KRH52364	Soybean	mitochondrion	24.09	58.93
CDY05475	Canola	mitochondrion	22.81	57.87
CDX75209	Canola	nucleus	24.27	57.83
CDX88162	Canola	cytosol, mitochondrion	23.18	57.73
CDY65539	Canola	cytosol, mitochondrion	23.18	57.73
CDY65538	Canola	cytosol, mitochondrion	23.18	57.73
CDY05376	Canola	cytosol, mitochondrion	22.26	56.48
CDY39951	Canola	cytosol	21.72	52.19
CDX87334	Canola	cytosol	21.72	51.29
CDX67961	Canola	cytosol	20.8	50.0
CDX79359	Canola	cytosol	20.44	49.12
CDX68806	Canola	nucleus	27.37	48.39
CDY09624	Canola	cytosol	16.97	43.26
CDX90471	Canola	cytosol	16.79	42.99
CDY27921	Canola	cytosol	16.06	39.64
CDX76571	Canola	cytosol	16.24	39.38
CDY10616	Canola	cytosol, nucleus, peroxisome	17.88	39.04
CDX77757	Canola	cytosol	16.61	37.45
CDY64684	Canola	cytosol	16.42	37.04
CDY25677	Canola	nucleus	17.88	36.43
CDY17812	Canola	nucleus	18.43	35.94
CDY17002	Canola	nucleus	18.07	35.23
CDY23657	Canola	nucleus	17.88	35.0
CDY49480	Canola	cytosol	11.13	24.11
CDX89404	Canola	cytosol	10.58	23.67
CDX94429	Canola	cytosol	10.4	23.27
CDY66007	Canola	cytosol	10.77	23.23
CDX94426	Canola	cytosol	10.4	22.62
CDX89402	Canola	cytosol	10.04	21.91

Protein Annotations

KEGG:00261+3.4.-.-	KEGG:00310+3.4.-.-	KEGG:00550+3.4.-.-	KEGG:00780+3.4.-.-	MapMan:19.4.1.7	Gene3D:2.60.120.330
Gene3D:3.90.1720.30	MapMan:9.2.2.4.3	GO:A0A078J2C1	UniProt:A0A078J2C1	MEROPS:C97.A08	EnsemblPlants:CDY56277
ProteinID:CDY56277	ProteinID:CDY56277.1	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00018040001	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF05903	PFAM:PF14226	InterPro:PPPDE_dom
PFscan:PS51471	PANTHER:PTHR12378	PANTHER:PTHR12378:SF12	SMART:SM01179	SUPFAM:SSF51197	UniParc:UPI0004EE81E8
SEG:seg	:	:	:	:	:

Description

BnaA09g55810DBnaA09g55810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2C1]

Coordinates

chrLK033474:-:11689..15057

Molecular Weight (calculated)

62050.5 Da

IEP (calculated)

7.707

GRAVY (calculated)

-0.411

Length

548 amino acids

Sequence
(BLAST)

001: MLCWSGSVKR KQKPGPFPVY LNVYDLTPMN AYGYWLGLGV FHSGVEVHGV EYAFGAHEYP STGIFEVEPK KCPGFTFRKS ILVGKTDTCA RDVRVYMEKL
101: AEEYRGNKYN LISRNCNHFC NEVCVKLTQK PIPRWVNRLA RLGVLCNCVL PPRLNESKVR RVVKEELSEG EKKRMRNTSR SGPLLTTSSS SSTPDNNHRS
201: HIRAKSTGNH SSSSMGTKEG QRHCAPQAQD KKSPSGHSLY EDEYIFLSRF TEYTSMARRI SSEIAGESKL YEFSDEILVI SLSGIDDVGG KKEDICPQIM
301: EAFEKWGMVQ AIDHGVDTNL MADMTSLARD FFALTTEEKL RFDMSGEAMK DWREIVMYST YPVSTRDYSR WPDKPEGWLK VTEEYSERLM GLAYKVLEVL
401: SEAMGLEKDA LKNACVDMEQ KIVVNYFPKR PKLDLALGMR HTDHGIITLL LQDQVSCLQA TRDNGNTWVT VPLVPGALVI NLGDIGHEVH DFRPSGGGLK
501: SSKLFINIFF FPAPHATVYP LKVRDGEKTI IEEPISFEEI TMRKLKDL

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.