Factsheet for AT2G25190.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus

Predictor Summary:

endoplasmic reticulum 2
golgi 2
extracellular 2
mitochondrion 3
nucleus 2
vacuole 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, vacuole
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76766	Canola	nucleus	81.25	82.63
CDY62507	Canola	nucleus, plasma membrane	82.92	82.57
CDY35370	Canola	nucleus, plasma membrane	83.33	81.3
Bra032034.1-P	Field mustard	nucleus, plasma membrane	84.17	81.12
AT5G25170.1	Thale cress	cytosol, mitochondrion	58.33	64.22
VIT_04s0008g05960.t01	Wine grape	mitochondrion	59.58	63.27
KRH15787	Soybean	mitochondrion	55.42	61.86
KRH05264	Soybean	cytosol, mitochondrion	55.42	61.57
KRH61696	Soybean	cytosol	53.75	59.45
KRH52364	Soybean	mitochondrion	55.0	58.93
AT1G80690.2	Thale cress	cytosol	50.0	51.95
AT4G17486.1	Thale cress	cytosol	35.83	38.39
AT5G47310.1	Thale cress	cytosol	37.5	36.73
AT1G47740.3	Thale cress	nucleus	42.5	36.56
CDY56277	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	81.25	35.58
Bra007813.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, peroxisome, plasma membrane, vacuole	80.83	35.4
AT4G25660.1	Thale cress	cytosol	25.0	23.53
AT4G25680.1	Thale cress	cytosol	24.58	23.41

Protein Annotations

MapMan:19.4.1.7	Gene3D:3.90.1720.30	EntrezGene:817057	UniProt:A0A178VT25	ProteinID:AAD23672.1	ProteinID:AEC07669.1
EMBL:AF370476	ArrayExpress:AT2G25190	EnsemblPlantsGene:AT2G25190	RefSeq:AT2G25190	TAIR:AT2G25190	RefSeq:AT2G25190-TAIR-G
EnsemblPlants:AT2G25190.1	TAIR:AT2G25190.1	EMBL:AY081691	EMBL:AY085239	Unigene:At.14335	MEROPS:C97.A08
GO:GO:0008150	RefSeq:NP_565588.1	UniProt:O81728	ProteinID:OAP08012.1	PFAM:PF05903	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
InterPro:PPPDE_dom	PANTHER:PTHR12378	PANTHER:PTHR12378:SF12	SMART:SM01179	UniParc:UPI0000052A10	SEG:seg

Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:O81728]

Coordinates

chr2:+:10733921..10735795

Molecular Weight (calculated)

26699.0 Da

IEP (calculated)

10.555

GRAVY (calculated)

-0.605

Length

240 amino acids

Sequence
(BLAST)

001: MLCFKGSVKR KKQSGSVPVY LNVYDLTPMN AYGYWLGLGV FHSGVEVHGV EYAFGAHESS STGIFEVEPK KCPGFTFRKS ILVGKTDLVA KEVRVFMEKL
101: AEEYQGNKYH LITRNCNHFC NEVCLKLAQK SIPRWVNRLA RLGVLCNCVL PPRLNEAKVR RVGKGELSES EKKKLRNRSR SDPLLSSSPS SSTPDNHRSH
201: IRAKSSGNHP SSSSSSSSGS KKNRRPKAQD QKSPSVSIKT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.