Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10616 | Canola | cytosol, nucleus, peroxisome | 84.23 | 93.63 |
| Bra032229.1-P | Field mustard | nucleus | 92.47 | 92.47 |
| CDY23657 | Canola | nucleus | 92.47 | 92.14 |
| CDY25677 | Canola | nucleus | 88.17 | 91.45 |
| Bra014091.1-P | Field mustard | nucleus | 91.04 | 90.39 |
| CDY17002 | Canola | nucleus | 91.04 | 90.39 |
| CDY17812 | Canola | nucleus | 91.04 | 90.39 |
| VIT_18s0001g12090.t01 | Wine grape | mitochondrion | 65.59 | 74.09 |
| KRH05795 | Soybean | mitochondrion | 65.59 | 72.91 |
| KRH15239 | Soybean | mitochondrion | 64.87 | 72.11 |
| Solyc12g089060.1.1 | Tomato | mitochondrion | 63.44 | 71.66 |
| PGSC0003DMT400039949 | Potato | mitochondrion | 63.08 | 71.26 |
| GSMUA_Achr7P25980_001 | Banana | mitochondrion | 51.97 | 69.71 |
| KRH49521 | Soybean | mitochondrion | 60.57 | 67.33 |
| KRG89196 | Soybean | mitochondrion | 60.22 | 66.93 |
| Solyc04g080030.2.1 | Tomato | mitochondrion | 58.06 | 66.67 |
| GSMUA_Achr4P07180_001 | Banana | cytosol, nucleus, peroxisome | 54.12 | 65.65 |
| KRH38144 | Soybean | mitochondrion | 50.54 | 65.58 |
| Zm00001d028130_P001 | Maize | mitochondrion | 57.71 | 64.4 |
| PGSC0003DMT400064873 | Potato | nucleus | 57.35 | 64.26 |
| Solyc01g109430.2.1 | Tomato | cytosol, mitochondrion, nucleus | 56.99 | 63.86 |
| EER95329 | Sorghum | mitochondrion | 57.35 | 63.49 |
| TraesCS4A01G040500.1 | Wheat | mitochondrion | 56.27 | 63.31 |
| TraesCS4B01G261700.1 | Wheat | mitochondrion | 55.91 | 62.9 |
| TraesCS4D01G261500.1 | Wheat | mitochondrion | 55.91 | 62.9 |
| Zm00001d048173_P001 | Maize | mitochondrion | 56.99 | 62.85 |
| Os03t0198500-01 | Rice | mitochondrion | 55.56 | 62.75 |
| GSMUA_Achr1P22650_001 | Banana | mitochondrion, nucleus, plasma membrane | 57.71 | 62.4 |
| KXG39054 | Sorghum | plastid | 53.41 | 60.08 |
| GSMUA_Achr4P14060_001 | Banana | cytosol, plastid, vacuole | 35.13 | 59.39 |
| PGSC0003DMT400071605 | Potato | mitochondrion | 60.57 | 59.3 |
| Zm00001d048567_P002 | Maize | endoplasmic reticulum, plasma membrane | 54.48 | 58.46 |
| AT5G25170.1 | Thale cress | cytosol, mitochondrion | 40.5 | 51.83 |
| VIT_03s0063g02130.t01 | Wine grape | mitochondrion | 60.22 | 50.15 |
| HORVU4Hr1G070620.3 | Barley | cytosol, nucleus, plastid | 58.06 | 49.09 |
| AT1G80690.2 | Thale cress | cytosol | 37.63 | 45.45 |
| AT4G17486.1 | Thale cress | cytosol | 35.84 | 44.64 |
| AT2G25190.1 | Thale cress | nucleus, vacuole | 36.56 | 42.5 |
| AT5G47310.1 | Thale cress | cytosol | 35.48 | 40.41 |
| AT4G25680.1 | Thale cress | cytosol | 19.35 | 21.43 |
| AT4G25660.1 | Thale cress | cytosol | 19.35 | 21.18 |
Protein Annotations
| MapMan:19.4.1.7 | Gene3D:3.90.1720.30 | EntrezGene:841185 | UniProt:A0A178W1V3 | ProteinID:AEE32206.1 | ProteinID:AEE32207.1 |
| EMBL:AK226946 | ProteinID:ANM60128.1 | ArrayExpress:AT1G47740 | EnsemblPlantsGene:AT1G47740 | RefSeq:AT1G47740 | TAIR:AT1G47740 |
| RefSeq:AT1G47740-TAIR-G | EnsemblPlants:AT1G47740.3 | EMBL:AY080764 | EMBL:AY114025 | Unigene:At.21602 | MEROPS:C97.A09 |
| GO:GO:0008150 | RefSeq:NP_001322435.1 | RefSeq:NP_564513.1 | RefSeq:NP_973987.1 | ProteinID:OAP12248.1 | PFAM:PF05903 |
| InterPro:PPPDE_dom | PANTHER:PTHR12378 | PANTHER:PTHR12378:SF11 | UniProt:Q8RXP3 | SMART:SM01179 | UniParc:UPI00000A5A48 |
| SEG:seg | : | : | : | : | : |
Description
PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
Coordinates
chr1:+:17566801..17569035
Molecular Weight (calculated)
31613.2 Da
IEP (calculated)
9.780
GRAVY (calculated)
-0.424
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.