Factsheet for Solyc04g080030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400071605	Potato	mitochondrion	97.53	83.16
Solyc12g089060.1.1	Tomato	mitochondrion	80.25	78.95
VIT_18s0001g12090.t01	Wine grape	mitochondrion	74.9	73.68
KRH15239	Soybean	mitochondrion	72.43	70.12
KRH05795	Soybean	mitochondrion	72.43	70.12
KRH38144	Soybean	mitochondrion	58.44	66.05
CDY10616	Canola	cytosol, nucleus, peroxisome	64.61	62.55
GSMUA_Achr7P25980_001	Banana	mitochondrion	53.5	62.5
Zm00001d028130_P001	Maize	mitochondrion	64.2	62.4
Solyc01g109430.2.1	Tomato	cytosol, mitochondrion, nucleus	63.79	62.25
TraesCS4A01G040500.1	Wheat	mitochondrion	63.37	62.1
TraesCS4B01G261700.1	Wheat	mitochondrion	63.37	62.1
TraesCS4D01G261500.1	Wheat	mitochondrion	63.37	62.1
Os03t0198500-01	Rice	mitochondrion	62.55	61.54
EER95329	Sorghum	mitochondrion	63.79	61.51
Zm00001d048173_P001	Maize	mitochondrion	63.79	61.26
GSMUA_Achr1P22650_001	Banana	mitochondrion, nucleus, plasma membrane	65.02	61.24
GSMUA_Achr4P07180_001	Banana	cytosol, nucleus, peroxisome	57.2	60.43
AT1G47740.3	Thale cress	nucleus	66.67	58.06
CDY25677	Canola	nucleus	63.37	57.25
KXG39054	Sorghum	plastid	58.02	56.85
Bra032229.1-P	Field mustard	nucleus	64.61	56.27
CDY17002	Canola	nucleus	65.02	56.23
CDY23657	Canola	nucleus	64.61	56.07
Bra014091.1-P	Field mustard	nucleus	64.61	55.87
CDY17812	Canola	nucleus	64.61	55.87
GSMUA_Achr4P14060_001	Banana	cytosol, plastid, vacuole	37.45	55.15
Zm00001d048567_P002	Maize	endoplasmic reticulum, plasma membrane	58.02	54.23
HORVU4Hr1G070620.3	Barley	cytosol, nucleus, plastid	64.2	47.27
Solyc08g078220.2.1	Tomato	cytosol	39.92	43.89
Solyc12g006880.1.1	Tomato	cytosol	40.33	43.75
Solyc03g117100.2.1	Tomato	cytosol	36.21	39.11
Solyc06g068380.2.1	Tomato	cytosol	37.45	34.47
Solyc03g034310.1.1	Tomato	cytosol	8.64	24.42
Solyc02g082060.1.1	Tomato	cytosol	19.34	22.07
Solyc03g008010.2.1	Tomato	cytosol	20.99	21.52

Protein Annotations

EnsemblPlants:Solyc04g080030.2.1	EnsemblPlantsGene:Solyc04g080030.2	Gene3D:3.90.1720.30	InterPro:PPPDE_dom	MEROPS:C97.A09	PANTHER:PTHR12378
PANTHER:PTHR12378:SF11	PFAM:PF05903	SMART:SM01179	UniParc:UPI0002765654	UniProt:K4BV82	MapMan:19.4.1.7

Description

No Description!

Coordinates

chr4:-:64321652..64324900

Molecular Weight (calculated)

27416.0 Da

IEP (calculated)

9.641

GRAVY (calculated)

-0.457

Length

243 amino acids

Sequence
(BLAST)

001: MSLQSKKGWK SVMPLRLKTK SSAHFCLLPK TKSDRFDPGE TPVCLNVYDL TPMNNYVYWA GFGIFHSGVE EYAFGAHDYP TSGVFEVEPR KCPGFKFRKS
101: ILVGTTKLDP NQVREFIEHQ AAAYNGDSYH LIVKNCNHFC KDICHKLTGK KIPKWVNRLA KLGSAFNCML PEALKVAAVE DEPNGPEYDS EKRRLRSAFS
201: CFSSISTRQQ KLSTSSLFLQ SPVKGCLPSL ELRKSTKCTS KEK

Best Arabidopsis Sequence Match ( AT1G47740.3 )
(BLAST)

001: MLNGKEEPKQ KKGWSESLLE FRSGFGEKMK VVSKKRWKSL GPLHLKSKSV ARFCFFSKLK SNNHGPGRAP VYLNVYDLTP INGYIYWAGL GIFHSGVEVH
101: GVEYAFGAHD YATSGVFEVE PRQCPGFKFK KSIFIGTTNL NPTQVREFME DMACSYYGNM YHLIVKNCNH FCQDVCYKLT GKKIPKWVNR LAQIGSVCSC
201: ILPESLKITA VCHDPDGQIP EEENEKRSLR SSFSCLSSIS MRQKQLSTSS LFLQSPLRGC LPPWQLKRSK SNSSSLKER

Arabidopsis Description

PPPDE putative thiol peptidase family protein [Source:UniProtKB/TrEMBL;Acc:Q8RXP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.